Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
EFCAB3Q8N7B9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EFCAB3Q8N7B9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.23■■□□□ 1.15
EFCAB3Q8N7B9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EFCAB3Q8N7B9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.23■■□□□ 1.15
EFCAB3Q8N7B9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.23■■□□□ 1.15
EFCAB3Q8N7B9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
EFCAB3Q8N7B9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
EFCAB3Q8N7B9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
EFCAB3Q8N7B9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
EFCAB3Q8N7B9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
EFCAB3Q8N7B9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.2■■□□□ 1.14
EFCAB3Q8N7B9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.2■■□□□ 1.14
EFCAB3Q8N7B9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.2■■□□□ 1.14
EFCAB3Q8N7B9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
EFCAB3Q8N7B9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCAB3Q8N7B9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 BX664725.1-201ENST00000438252 379 ntBASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
EFCAB3Q8N7B9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCAB3Q8N7B9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCAB3Q8N7B9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
EFCAB3Q8N7B9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
EFCAB3Q8N7B9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.16■■□□□ 1.14
EFCAB3Q8N7B9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCAB3Q8N7B9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCAB3Q8N7B9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCAB3Q8N7B9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.15■■□□□ 1.14
EFCAB3Q8N7B9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.15■■□□□ 1.14
EFCAB3Q8N7B9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCAB3Q8N7B9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
EFCAB3Q8N7B9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
EFCAB3Q8N7B9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCAB3Q8N7B9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
EFCAB3Q8N7B9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
EFCAB3Q8N7B9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 AC022616.5-201ENST00000518796 181 ntBASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 MIR4787-201ENST00000607364 84 ntBASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCAB3Q8N7B9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms