Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SYNPOQ8N3V7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SYNPOQ8N3V7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.03■■□□□ 1.28
SYNPOQ8N3V7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.03■■□□□ 1.28
SYNPOQ8N3V7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.03■■□□□ 1.28
SYNPOQ8N3V7 RARRES2P11-201ENST00000635158 484 ntBASIC23.03■■□□□ 1.28
SYNPOQ8N3V7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SYNPOQ8N3V7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 pRNA.6-201ENST00000610482 90 ntBASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 pRNA.5-201ENST00000612139 90 ntBASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 pRNA.11-201ENST00000618423 90 ntBASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 pRNA.13-201ENST00000619112 90 ntBASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SYNPOQ8N3V7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 AC022517.1-201ENST00000592429 346 ntBASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 AL358852.1-201ENST00000623174 1268 ntBASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SYNPOQ8N3V7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SYNPOQ8N3V7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SYNPOQ8N3V7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
SYNPOQ8N3V7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23■■□□□ 1.27
SYNPOQ8N3V7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SYNPOQ8N3V7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23■■□□□ 1.27
SYNPOQ8N3V7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SYNPOQ8N3V7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23■■□□□ 1.27
SYNPOQ8N3V7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23■■□□□ 1.27
SYNPOQ8N3V7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 AC123595.1-201ENST00000440769 1046 ntBASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.99■■□□□ 1.27
SYNPOQ8N3V7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 AC141586.4-201ENST00000624558 1573 ntBASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 AC090192.1-201ENST00000517740 490 ntBASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 AL137784.2-201ENST00000607332 1000 ntBASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 TSPY26P-201ENST00000476365 1326 ntBASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.98■■□□□ 1.27
SYNPOQ8N3V7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 AC027612.3-201ENST00000413684 1047 ntBASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 KRT18P5-201ENST00000436075 1291 ntBASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 SLC47A1P1-202ENST00000449666 945 ntBASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SYNPOQ8N3V7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms