Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 HLA-V-202ENST00000446817 847 ntBASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD2Q8IV50 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD2Q8IV50 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD2Q8IV50 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD2Q8IV50 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD2Q8IV50 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD2Q8IV50 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LYSMD2Q8IV50 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.83■□□□□ 0.77
LYSMD2Q8IV50 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD2Q8IV50 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD2Q8IV50 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.83■□□□□ 0.76
LYSMD2Q8IV50 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LYSMD2Q8IV50 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD2Q8IV50 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD2Q8IV50 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD2Q8IV50 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD2Q8IV50 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.82■□□□□ 0.76
LYSMD2Q8IV50 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD2Q8IV50 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 AC092053.2-201ENST00000640557 1818 ntBASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.8■□□□□ 0.76
LYSMD2Q8IV50 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LYSMD2Q8IV50 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LYSMD2Q8IV50 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms