Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC28Q86X40 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC28Q86X40 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRRC28Q86X40 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRRC28Q86X40 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC28Q86X40 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20■□□□□ 0.79
LRRC28Q86X40 YBX1P4-201ENST00000392794 808 ntBASIC20■□□□□ 0.79
LRRC28Q86X40 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20■□□□□ 0.79
LRRC28Q86X40 AC103834.1-201ENST00000520383 144 ntBASIC20■□□□□ 0.79
LRRC28Q86X40 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20■□□□□ 0.79
LRRC28Q86X40 MIR4508-201ENST00000584178 70 ntBASIC20■□□□□ 0.79
LRRC28Q86X40 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20■□□□□ 0.79
LRRC28Q86X40 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20■□□□□ 0.79
LRRC28Q86X40 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC28Q86X40 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LRRC28Q86X40 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC28Q86X40 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20■□□□□ 0.79
LRRC28Q86X40 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC28Q86X40 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20■□□□□ 0.79
LRRC28Q86X40 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 AC092068.2-201ENST00000590491 1708 ntBASIC19.99■□□□□ 0.79
LRRC28Q86X40 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC28Q86X40 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRC28Q86X40 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRC28Q86X40 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC28Q86X40 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC28Q86X40 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 KRT8P33-201ENST00000508125 1423 ntBASIC19.98■□□□□ 0.79
LRRC28Q86X40 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC28Q86X40 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC28Q86X40 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC28Q86X40 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LRRC28Q86X40 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC28Q86X40 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC28Q86X40 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRRC28Q86X40 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRRC28Q86X40 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC28Q86X40 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC28Q86X40 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC28Q86X40 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC28Q86X40 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC28Q86X40 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC28Q86X40 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.96■□□□□ 0.79
LRRC28Q86X40 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
LRRC28Q86X40 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC28Q86X40 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC28Q86X40 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC28Q86X40 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC28Q86X40 AL024507.2-201ENST00000606070 2574 ntBASIC19.96■□□□□ 0.79
LRRC28Q86X40 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRRC28Q86X40 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC28Q86X40 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC28Q86X40 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC28Q86X40 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC28Q86X40 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC28Q86X40 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC28Q86X40 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRC28Q86X40 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC28Q86X40 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC28Q86X40 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC28Q86X40 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC28Q86X40 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRRC28Q86X40 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.95■□□□□ 0.78
LRRC28Q86X40 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC28Q86X40 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LRRC28Q86X40 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LRRC28Q86X40 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC28Q86X40 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC28Q86X40 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC28Q86X40 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC28Q86X40 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC28Q86X40 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC28Q86X40 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC28Q86X40 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC28Q86X40 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC28Q86X40 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC28Q86X40 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC28Q86X40 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC28Q86X40 AC022616.5-201ENST00000518796 181 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms