Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S3Q6QNY0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S3Q6QNY0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S3Q6QNY0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S3Q6QNY0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S3Q6QNY0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.58■■□□□ 1.04
BLOC1S3Q6QNY0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S3Q6QNY0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S3Q6QNY0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S3Q6QNY0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S3Q6QNY0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.56■■□□□ 1.04
BLOC1S3Q6QNY0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S3Q6QNY0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S3Q6QNY0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S3Q6QNY0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S3Q6QNY0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 AC129492.7-201ENST00000622992 756 ntBASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BLOC1S3Q6QNY0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S3Q6QNY0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BLOC1S3Q6QNY0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
BLOC1S3Q6QNY0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 AC137767.1-201ENST00000602918 1920 ntBASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.51■■□□□ 1.03
BLOC1S3Q6QNY0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 AC242852.2-201ENST00000615738 1807 ntBASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 AC079630.1-202ENST00000618127 1840 ntBASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 AC019171.1-201ENST00000601251 1056 ntBASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 U85056.1-201ENST00000616429 682 ntBASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BLOC1S3Q6QNY0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.49■■□□□ 1.03
BLOC1S3Q6QNY0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
BLOC1S3Q6QNY0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S3Q6QNY0 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.49■■□□□ 1.03
BLOC1S3Q6QNY0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S3Q6QNY0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
BLOC1S3Q6QNY0 AC022616.5-201ENST00000518796 181 ntBASIC21.49■■□□□ 1.03
BLOC1S3Q6QNY0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms