Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 FBXW4P1-201ENST00000426721 2239 ntBASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 AC026310.3-201ENST00000625186 2373 ntBASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.11■□□□□ 0.33
CDPF1Q6NVV7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDPF1Q6NVV7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDPF1Q6NVV7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDPF1Q6NVV7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDPF1Q6NVV7 AL157384.1-201ENST00000445995 2473 ntBASIC17.1■□□□□ 0.33
CDPF1Q6NVV7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDPF1Q6NVV7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.1■□□□□ 0.33
CDPF1Q6NVV7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.09■□□□□ 0.33
CDPF1Q6NVV7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDPF1Q6NVV7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CDPF1Q6NVV7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDPF1Q6NVV7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDPF1Q6NVV7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.08■□□□□ 0.32
CDPF1Q6NVV7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.08■□□□□ 0.32
CDPF1Q6NVV7 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.08■□□□□ 0.32
CDPF1Q6NVV7 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.08■□□□□ 0.32
CDPF1Q6NVV7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDPF1Q6NVV7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDPF1Q6NVV7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDPF1Q6NVV7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 PKD1P6-201ENST00000343738 4769 ntBASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDPF1Q6NVV7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDPF1Q6NVV7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDPF1Q6NVV7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms