Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
CDNFQ49AH0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CDNFQ49AH0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDNFQ49AH0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDNFQ49AH0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDNFQ49AH0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.33■□□□□ 0.68
CDNFQ49AH0 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.33■□□□□ 0.68
CDNFQ49AH0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDNFQ49AH0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDNFQ49AH0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDNFQ49AH0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDNFQ49AH0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDNFQ49AH0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDNFQ49AH0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDNFQ49AH0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDNFQ49AH0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDNFQ49AH0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDNFQ49AH0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.32■□□□□ 0.68
CDNFQ49AH0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDNFQ49AH0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDNFQ49AH0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDNFQ49AH0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
CDNFQ49AH0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDNFQ49AH0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDNFQ49AH0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDNFQ49AH0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.31■□□□□ 0.68
CDNFQ49AH0 RPS2P7-201ENST00000447334 885 ntBASIC19.31■□□□□ 0.68
CDNFQ49AH0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.31■□□□□ 0.68
CDNFQ49AH0 MIR7108-201ENST00000614319 87 ntBASIC19.31■□□□□ 0.68
CDNFQ49AH0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.31■□□□□ 0.68
CDNFQ49AH0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDNFQ49AH0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDNFQ49AH0 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.31■□□□□ 0.68
CDNFQ49AH0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDNFQ49AH0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.3■□□□□ 0.68
CDNFQ49AH0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.3■□□□□ 0.68
CDNFQ49AH0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDNFQ49AH0 AC133552.2-201ENST00000619106 1032 ntBASIC19.3■□□□□ 0.68
CDNFQ49AH0 AC009831.1-201ENST00000580420 1582 ntBASIC19.3■□□□□ 0.68
CDNFQ49AH0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CDNFQ49AH0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDNFQ49AH0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDNFQ49AH0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
CDNFQ49AH0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.29■□□□□ 0.68
CDNFQ49AH0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 ECEL1P1-201ENST00000373592 1742 ntBASIC19.28■□□□□ 0.68
CDNFQ49AH0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 AL592295.1-201ENST00000400984 884 ntBASIC19.28■□□□□ 0.68
CDNFQ49AH0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 AL022069.1-201ENST00000568025 1636 ntBASIC19.28■□□□□ 0.68
CDNFQ49AH0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDNFQ49AH0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDNFQ49AH0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDNFQ49AH0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDNFQ49AH0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDNFQ49AH0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDNFQ49AH0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CDNFQ49AH0 AC127496.7-201ENST00000625110 1798 ntBASIC19.27■□□□□ 0.68
CDNFQ49AH0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDNFQ49AH0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.27■□□□□ 0.68
CDNFQ49AH0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDNFQ49AH0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDNFQ49AH0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDNFQ49AH0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDNFQ49AH0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDNFQ49AH0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDNFQ49AH0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
CDNFQ49AH0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDNFQ49AH0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.26■□□□□ 0.67
CDNFQ49AH0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms