Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USH1GQ495M9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USH1GQ495M9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
USH1GQ495M9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USH1GQ495M9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.02■■□□□ 1.76
USH1GQ495M9 LINC00543-201ENST00000567234 1845 ntBASIC26.02■■□□□ 1.76
USH1GQ495M9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.02■■□□□ 1.76
USH1GQ495M9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.02■■□□□ 1.76
USH1GQ495M9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USH1GQ495M9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USH1GQ495M9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USH1GQ495M9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
USH1GQ495M9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
USH1GQ495M9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
USH1GQ495M9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
USH1GQ495M9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
USH1GQ495M9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
USH1GQ495M9 AC004812.2-201ENST00000611079 2094 ntBASIC26■■□□□ 1.75
USH1GQ495M9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26■■□□□ 1.75
USH1GQ495M9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26■■□□□ 1.75
USH1GQ495M9 AC142381.2-201ENST00000566120 298 ntBASIC26■■□□□ 1.75
USH1GQ495M9 AL031432.3-201ENST00000607698 485 ntBASIC26■■□□□ 1.75
USH1GQ495M9 SF1-220ENST00000626028 704 ntTSL 2 BASIC26■■□□□ 1.75
USH1GQ495M9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USH1GQ495M9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USH1GQ495M9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
USH1GQ495M9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.99■■□□□ 1.75
USH1GQ495M9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.99■■□□□ 1.75
USH1GQ495M9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
USH1GQ495M9 AC009086.3-201ENST00000623486 1008 ntBASIC25.99■■□□□ 1.75
USH1GQ495M9 AC241377.3-202ENST00000626088 1088 ntBASIC25.99■■□□□ 1.75
USH1GQ495M9 AC241585.3-202ENST00000628937 1088 ntBASIC25.99■■□□□ 1.75
USH1GQ495M9 AC245100.8-202ENST00000629247 1058 ntBASIC25.99■■□□□ 1.75
USH1GQ495M9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
USH1GQ495M9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.99■■□□□ 1.75
USH1GQ495M9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.99■■□□□ 1.75
USH1GQ495M9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
USH1GQ495M9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USH1GQ495M9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
USH1GQ495M9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USH1GQ495M9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USH1GQ495M9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
USH1GQ495M9 AC141586.4-201ENST00000624558 1573 ntBASIC25.98■■□□□ 1.75
USH1GQ495M9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
USH1GQ495M9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.97■■□□□ 1.75
USH1GQ495M9 MIR4767-201ENST00000582827 78 ntBASIC25.97■■□□□ 1.75
USH1GQ495M9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
USH1GQ495M9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.97■■□□□ 1.75
USH1GQ495M9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
USH1GQ495M9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
USH1GQ495M9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.96■■□□□ 1.75
USH1GQ495M9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
USH1GQ495M9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.96■■□□□ 1.75
USH1GQ495M9 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.96■■□□□ 1.75
USH1GQ495M9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
USH1GQ495M9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.95■■□□□ 1.75
USH1GQ495M9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
USH1GQ495M9 EDA-201ENST00000338901 1233 ntBASIC25.95■■□□□ 1.74
USH1GQ495M9 MIR935-201ENST00000401179 91 ntBASIC25.95■■□□□ 1.74
USH1GQ495M9 SUDS3P1-201ENST00000505831 966 ntBASIC25.95■■□□□ 1.74
USH1GQ495M9 AL355001.2-201ENST00000620617 1191 ntBASIC25.95■■□□□ 1.74
USH1GQ495M9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.95■■□□□ 1.74
USH1GQ495M9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
USH1GQ495M9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.95■■□□□ 1.74
USH1GQ495M9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.95■■□□□ 1.74
USH1GQ495M9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
USH1GQ495M9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
USH1GQ495M9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.95■■□□□ 1.74
USH1GQ495M9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
USH1GQ495M9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
USH1GQ495M9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
USH1GQ495M9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.94■■□□□ 1.74
USH1GQ495M9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
USH1GQ495M9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
USH1GQ495M9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
USH1GQ495M9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
USH1GQ495M9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
USH1GQ495M9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
USH1GQ495M9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
USH1GQ495M9 ABCB10P4-201ENST00000566803 2184 ntBASIC25.93■■□□□ 1.74
USH1GQ495M9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.93■■□□□ 1.74
USH1GQ495M9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
USH1GQ495M9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
USH1GQ495M9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
USH1GQ495M9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.92■■□□□ 1.74
USH1GQ495M9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
USH1GQ495M9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.92■■□□□ 1.74
USH1GQ495M9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
USH1GQ495M9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
USH1GQ495M9 AF213884.3-201ENST00000563833 479 ntBASIC25.92■■□□□ 1.74
USH1GQ495M9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
USH1GQ495M9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.92■■□□□ 1.74
USH1GQ495M9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
USH1GQ495M9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
USH1GQ495M9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
USH1GQ495M9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
USH1GQ495M9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
USH1GQ495M9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.91■■□□□ 1.74
USH1GQ495M9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.91■■□□□ 1.74
USH1GQ495M9 MIR3181-201ENST00000578512 73 ntBASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms