Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D28Q2M2D7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TBC1D28Q2M2D7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D28Q2M2D7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D28Q2M2D7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D28Q2M2D7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D28Q2M2D7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D28Q2M2D7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TBC1D28Q2M2D7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TBC1D28Q2M2D7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D28Q2M2D7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D28Q2M2D7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D28Q2M2D7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D28Q2M2D7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.56■□□□□ 0.72
TBC1D28Q2M2D7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TBC1D28Q2M2D7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TBC1D28Q2M2D7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 AC009102.2-201ENST00000606772 1639 ntBASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.54■□□□□ 0.72
TBC1D28Q2M2D7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.53■□□□□ 0.72
TBC1D28Q2M2D7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms