Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5R1Q15078 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK5R1Q15078 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5R1Q15078 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDK5R1Q15078 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5R1Q15078 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDK5R1Q15078 AL592293.1-201ENST00000502889 1188 ntBASIC19.89■□□□□ 0.77
CDK5R1Q15078 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.89■□□□□ 0.77
CDK5R1Q15078 AC131274.2-201ENST00000580697 1507 ntBASIC19.89■□□□□ 0.77
CDK5R1Q15078 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5R1Q15078 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CDK5R1Q15078 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5R1Q15078 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5R1Q15078 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5R1Q15078 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5R1Q15078 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CDK5R1Q15078 AC137767.1-201ENST00000602918 1920 ntBASIC19.88■□□□□ 0.77
CDK5R1Q15078 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5R1Q15078 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5R1Q15078 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5R1Q15078 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDK5R1Q15078 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5R1Q15078 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5R1Q15078 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.86■□□□□ 0.77
CDK5R1Q15078 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5R1Q15078 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CDK5R1Q15078 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5R1Q15078 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDK5R1Q15078 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5R1Q15078 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.85■□□□□ 0.77
CDK5R1Q15078 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5R1Q15078 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.85■□□□□ 0.77
CDK5R1Q15078 MIR6765-201ENST00000614092 87 ntBASIC19.85■□□□□ 0.77
CDK5R1Q15078 ESRRAP2-201ENST00000418437 1549 ntBASIC19.85■□□□□ 0.77
CDK5R1Q15078 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5R1Q15078 AC242852.2-201ENST00000615738 1807 ntBASIC19.85■□□□□ 0.77
CDK5R1Q15078 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5R1Q15078 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CDK5R1Q15078 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5R1Q15078 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CDK5R1Q15078 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDK5R1Q15078 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5R1Q15078 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5R1Q15078 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5R1Q15078 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5R1Q15078 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5R1Q15078 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.84■□□□□ 0.77
CDK5R1Q15078 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5R1Q15078 AC011551.1-201ENST00000614101 683 ntBASIC19.84■□□□□ 0.77
CDK5R1Q15078 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CDK5R1Q15078 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5R1Q15078 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5R1Q15078 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5R1Q15078 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5R1Q15078 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDK5R1Q15078 LONRF2P2-201ENST00000439212 571 ntBASIC19.83■□□□□ 0.77
CDK5R1Q15078 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.83■□□□□ 0.76
CDK5R1Q15078 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5R1Q15078 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5R1Q15078 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5R1Q15078 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5R1Q15078 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5R1Q15078 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDK5R1Q15078 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDK5R1Q15078 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5R1Q15078 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5R1Q15078 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms