Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PER3P56645 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.74■□□□□ 0.91
PER3P56645 AC091305.1-201ENST00000479476 895 ntBASIC20.74■□□□□ 0.91
PER3P56645 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.74■□□□□ 0.91
PER3P56645 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PER3P56645 AL136967.2-201ENST00000623968 743 ntBASIC20.74■□□□□ 0.91
PER3P56645 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PER3P56645 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.74■□□□□ 0.91
PER3P56645 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PER3P56645 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PER3P56645 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.73■□□□□ 0.91
PER3P56645 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PER3P56645 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PER3P56645 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PER3P56645 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PER3P56645 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.73■□□□□ 0.91
PER3P56645 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PER3P56645 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PER3P56645 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PER3P56645 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PER3P56645 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PER3P56645 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.72■□□□□ 0.91
PER3P56645 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PER3P56645 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PER3P56645 MIR939-201ENST00000401314 82 ntBASIC20.72■□□□□ 0.91
PER3P56645 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PER3P56645 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PER3P56645 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PER3P56645 AC097381.1-201ENST00000429019 1296 ntBASIC20.71■□□□□ 0.91
PER3P56645 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.71■□□□□ 0.91
PER3P56645 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PER3P56645 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.71■□□□□ 0.91
PER3P56645 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
PER3P56645 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PER3P56645 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.71■□□□□ 0.91
PER3P56645 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PER3P56645 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PER3P56645 AP001330.3-201ENST00000520123 633 ntBASIC20.7■□□□□ 0.9
PER3P56645 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.7■□□□□ 0.9
PER3P56645 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PER3P56645 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PER3P56645 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.7■□□□□ 0.9
PER3P56645 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PER3P56645 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PER3P56645 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PER3P56645 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PER3P56645 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PER3P56645 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.69■□□□□ 0.9
PER3P56645 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PER3P56645 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PER3P56645 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PER3P56645 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
PER3P56645 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PER3P56645 SYT6-210ENST00000641643 1587 ntBASIC20.68■□□□□ 0.9
PER3P56645 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.68■□□□□ 0.9
PER3P56645 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.68■□□□□ 0.9
PER3P56645 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PER3P56645 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PER3P56645 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PER3P56645 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PER3P56645 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PER3P56645 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.67■□□□□ 0.9
PER3P56645 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.67■□□□□ 0.9
PER3P56645 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
PER3P56645 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.67■□□□□ 0.9
PER3P56645 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PER3P56645 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PER3P56645 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PER3P56645 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.66■□□□□ 0.9
PER3P56645 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
PER3P56645 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.66■□□□□ 0.9
PER3P56645 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PER3P56645 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PER3P56645 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PER3P56645 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PER3P56645 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PER3P56645 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.65■□□□□ 0.9
PER3P56645 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.65■□□□□ 0.9
PER3P56645 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PER3P56645 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PER3P56645 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.65■□□□□ 0.9
PER3P56645 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PER3P56645 AC005703.6-201ENST00000623265 1329 ntBASIC20.65■□□□□ 0.9
PER3P56645 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PER3P56645 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PER3P56645 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.65■□□□□ 0.9
PER3P56645 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PER3P56645 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PER3P56645 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PER3P56645 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.65■□□□□ 0.9
PER3P56645 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms