Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH12P55289 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH12P55289 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH12P55289 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH12P55289 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH12P55289 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH12P55289 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH12P55289 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH12P55289 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH12P55289 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH12P55289 AL022069.1-201ENST00000568025 1636 ntBASIC20.96■□□□□ 0.95
CDH12P55289 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH12P55289 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH12P55289 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CDH12P55289 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CDH12P55289 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH12P55289 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH12P55289 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH12P55289 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH12P55289 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH12P55289 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDH12P55289 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDH12P55289 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH12P55289 TSPY13P-201ENST00000338964 914 ntBASIC20.95■□□□□ 0.94
CDH12P55289 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH12P55289 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH12P55289 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH12P55289 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
CDH12P55289 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDH12P55289 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDH12P55289 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.94■□□□□ 0.94
CDH12P55289 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDH12P55289 PVT1_1.1-201ENST00000615125 194 ntBASIC20.94■□□□□ 0.94
CDH12P55289 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH12P55289 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH12P55289 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH12P55289 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH12P55289 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH12P55289 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH12P55289 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDH12P55289 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.93■□□□□ 0.94
CDH12P55289 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDH12P55289 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDH12P55289 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH12P55289 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH12P55289 LINC00565-201ENST00000562710 2331 ntBASIC20.92■□□□□ 0.94
CDH12P55289 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH12P55289 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.92■□□□□ 0.94
CDH12P55289 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDH12P55289 AC074183.2-201ENST00000623112 922 ntBASIC20.92■□□□□ 0.94
CDH12P55289 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
CDH12P55289 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CDH12P55289 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.92■□□□□ 0.94
CDH12P55289 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH12P55289 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH12P55289 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH12P55289 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH12P55289 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH12P55289 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH12P55289 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.91■□□□□ 0.94
CDH12P55289 AC120024.1-201ENST00000562672 995 ntBASIC20.91■□□□□ 0.94
CDH12P55289 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH12P55289 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH12P55289 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 GUSBP5-202ENST00000510805 1989 ntBASIC20.9■□□□□ 0.94
CDH12P55289 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH12P55289 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH12P55289 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDH12P55289 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH12P55289 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH12P55289 AC010980.1-201ENST00000587192 1142 ntBASIC20.9■□□□□ 0.94
CDH12P55289 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms