Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH11P55287 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDH11P55287 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH11P55287 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDH11P55287 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH11P55287 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH11P55287 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH11P55287 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH11P55287 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.58■□□□□ 0.89
CDH11P55287 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.58■□□□□ 0.89
CDH11P55287 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDH11P55287 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH11P55287 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH11P55287 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDH11P55287 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH11P55287 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH11P55287 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH11P55287 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH11P55287 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH11P55287 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH11P55287 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDH11P55287 AC092068.2-201ENST00000590491 1708 ntBASIC20.57■□□□□ 0.88
CDH11P55287 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH11P55287 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH11P55287 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH11P55287 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH11P55287 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH11P55287 DUSP8P3-201ENST00000399571 1760 ntBASIC20.57■□□□□ 0.88
CDH11P55287 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH11P55287 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH11P55287 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH11P55287 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH11P55287 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH11P55287 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH11P55287 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CDH11P55287 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH11P55287 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH11P55287 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH11P55287 CLDN5-201ENST00000403084 2357 ntBASIC20.56■□□□□ 0.88
CDH11P55287 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDH11P55287 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH11P55287 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDH11P55287 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH11P55287 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDH11P55287 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH11P55287 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH11P55287 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDH11P55287 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH11P55287 GUSBP5-201ENST00000418136 578 ntBASIC20.55■□□□□ 0.88
CDH11P55287 AC090877.2-201ENST00000558441 1738 ntBASIC20.55■□□□□ 0.88
CDH11P55287 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH11P55287 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH11P55287 AL161729.1-201ENST00000604104 1402 ntBASIC20.54■□□□□ 0.88
CDH11P55287 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH11P55287 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH11P55287 THA1P-201ENST00000590384 1145 ntBASIC20.54■□□□□ 0.88
CDH11P55287 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH11P55287 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDH11P55287 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH11P55287 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH11P55287 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH11P55287 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDH11P55287 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDH11P55287 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDH11P55287 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.53■□□□□ 0.88
CDH11P55287 AC239859.2-201ENST00000444165 318 ntBASIC20.53■□□□□ 0.88
CDH11P55287 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH11P55287 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH11P55287 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH11P55287 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH11P55287 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH11P55287 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH11P55287 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH11P55287 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CDH11P55287 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
CDH11P55287 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDH11P55287 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH11P55287 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
CDH11P55287 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
CDH11P55287 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH11P55287 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH11P55287 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH11P55287 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH11P55287 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH11P55287 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH11P55287 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH11P55287 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH11P55287 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.51■□□□□ 0.87
CDH11P55287 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH11P55287 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH11P55287 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms