Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.83■■□□□ 1.08
EPHA4P54764 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.83■■□□□ 1.08
EPHA4P54764 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
EPHA4P54764 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHA4P54764 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHA4P54764 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHA4P54764 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.82■■□□□ 1.08
EPHA4P54764 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.82■■□□□ 1.08
EPHA4P54764 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHA4P54764 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.82■■□□□ 1.08
EPHA4P54764 AC091305.1-201ENST00000479476 895 ntBASIC21.82■■□□□ 1.08
EPHA4P54764 AC136469.2-201ENST00000623944 1028 ntBASIC21.82■■□□□ 1.08
EPHA4P54764 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
EPHA4P54764 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.82■■□□□ 1.08
EPHA4P54764 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
EPHA4P54764 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
EPHA4P54764 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
EPHA4P54764 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.81■■□□□ 1.08
EPHA4P54764 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
EPHA4P54764 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.81■■□□□ 1.08
EPHA4P54764 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.8■■□□□ 1.08
EPHA4P54764 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
EPHA4P54764 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EPHA4P54764 AC020928.2-201ENST00000588717 2197 ntBASIC21.8■■□□□ 1.08
EPHA4P54764 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
EPHA4P54764 AC141586.4-201ENST00000624558 1573 ntBASIC21.8■■□□□ 1.08
EPHA4P54764 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
EPHA4P54764 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.8■■□□□ 1.08
EPHA4P54764 AC006455.2-201ENST00000429931 906 ntBASIC21.8■■□□□ 1.08
EPHA4P54764 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
EPHA4P54764 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
EPHA4P54764 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
EPHA4P54764 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EPHA4P54764 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EPHA4P54764 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EPHA4P54764 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
EPHA4P54764 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHA4P54764 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHA4P54764 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
EPHA4P54764 AC027682.1-201ENST00000562846 899 ntBASIC21.79■■□□□ 1.08
EPHA4P54764 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.79■■□□□ 1.08
EPHA4P54764 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.79■■□□□ 1.08
EPHA4P54764 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
EPHA4P54764 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHA4P54764 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA4P54764 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.78■■□□□ 1.08
EPHA4P54764 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA4P54764 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA4P54764 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA4P54764 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA4P54764 MIR3181-201ENST00000578512 73 ntBASIC21.78■■□□□ 1.08
EPHA4P54764 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.78■■□□□ 1.08
EPHA4P54764 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA4P54764 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA4P54764 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.77■■□□□ 1.08
EPHA4P54764 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA4P54764 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA4P54764 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA4P54764 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA4P54764 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA4P54764 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.77■■□□□ 1.08
EPHA4P54764 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA4P54764 ZNRF2P3-201ENST00000424200 374 ntBASIC21.77■■□□□ 1.08
EPHA4P54764 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA4P54764 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.76■■□□□ 1.07
EPHA4P54764 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 RASA4CP-201ENST00000424092 1398 ntBASIC21.76■■□□□ 1.07
EPHA4P54764 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA4P54764 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.75■■□□□ 1.07
EPHA4P54764 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.75■■□□□ 1.07
EPHA4P54764 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
EPHA4P54764 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.75■■□□□ 1.07
EPHA4P54764 AC105265.2-201ENST00000467189 838 ntBASIC21.75■■□□□ 1.07
EPHA4P54764 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.75■■□□□ 1.07
EPHA4P54764 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA4P54764 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.74■■□□□ 1.07
EPHA4P54764 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.74■■□□□ 1.07
EPHA4P54764 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA4P54764 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms