Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-5P52952 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-5P52952 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NKX2-5P52952 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-5P52952 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
NKX2-5P52952 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NKX2-5P52952 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.34■□□□□ 0.69
NKX2-5P52952 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-5P52952 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-5P52952 C11orf96-202ENST00000528572 1834 ntBASIC19.33■□□□□ 0.69
NKX2-5P52952 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX2-5P52952 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-5P52952 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-5P52952 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NKX2-5P52952 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
NKX2-5P52952 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX2-5P52952 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-5P52952 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-5P52952 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-5P52952 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.32■□□□□ 0.68
NKX2-5P52952 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-5P52952 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-5P52952 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-5P52952 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-5P52952 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
NKX2-5P52952 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-5P52952 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-5P52952 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-5P52952 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX2-5P52952 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NKX2-5P52952 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-5P52952 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX2-5P52952 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-5P52952 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
NKX2-5P52952 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-5P52952 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-5P52952 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-5P52952 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-5P52952 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-5P52952 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-5P52952 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-5P52952 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NKX2-5P52952 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-5P52952 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-5P52952 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-5P52952 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-5P52952 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-5P52952 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NKX2-5P52952 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-5P52952 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-5P52952 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-5P52952 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-5P52952 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-5P52952 AC092068.2-201ENST00000590491 1708 ntBASIC19.28■□□□□ 0.68
NKX2-5P52952 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-5P52952 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-5P52952 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-5P52952 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.28■□□□□ 0.68
NKX2-5P52952 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-5P52952 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NKX2-5P52952 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-5P52952 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-5P52952 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-5P52952 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-5P52952 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-5P52952 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-5P52952 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.27■□□□□ 0.68
NKX2-5P52952 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-5P52952 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
NKX2-5P52952 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-5P52952 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.27■□□□□ 0.68
NKX2-5P52952 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-5P52952 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-5P52952 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.27■□□□□ 0.68
NKX2-5P52952 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
NKX2-5P52952 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.27■□□□□ 0.67
NKX2-5P52952 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NKX2-5P52952 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NKX2-5P52952 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NKX2-5P52952 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-5P52952 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-5P52952 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.26■□□□□ 0.67
NKX2-5P52952 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-5P52952 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.26■□□□□ 0.67
NKX2-5P52952 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-5P52952 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-5P52952 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.26■□□□□ 0.67
NKX2-5P52952 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NKX2-5P52952 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-5P52952 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms