Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMSP52788 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.05■□□□□ 0.96
SMSP52788 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMSP52788 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.05■□□□□ 0.96
SMSP52788 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.05■□□□□ 0.96
SMSP52788 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMSP52788 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SMSP52788 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.04■□□□□ 0.96
SMSP52788 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SMSP52788 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SMSP52788 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMSP52788 AC079834.2-201ENST00000609776 1949 ntBASIC21.04■□□□□ 0.96
SMSP52788 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMSP52788 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMSP52788 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMSP52788 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMSP52788 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMSP52788 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMSP52788 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMSP52788 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMSP52788 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SMSP52788 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.02■□□□□ 0.96
SMSP52788 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMSP52788 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.02■□□□□ 0.96
SMSP52788 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.02■□□□□ 0.96
SMSP52788 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.02■□□□□ 0.96
SMSP52788 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.02■□□□□ 0.96
SMSP52788 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.02■□□□□ 0.96
SMSP52788 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMSP52788 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SMSP52788 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMSP52788 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
SMSP52788 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMSP52788 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMSP52788 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.01■□□□□ 0.95
SMSP52788 AC096631.2-201ENST00000436136 790 ntBASIC21.01■□□□□ 0.95
SMSP52788 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.01■□□□□ 0.95
SMSP52788 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMSP52788 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMSP52788 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SMSP52788 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMSP52788 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SMSP52788 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21■□□□□ 0.95
SMSP52788 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21■□□□□ 0.95
SMSP52788 AC005837.3-201ENST00000612163 286 ntBASIC21■□□□□ 0.95
SMSP52788 AC110285.6-201ENST00000617652 491 ntBASIC21■□□□□ 0.95
SMSP52788 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SMSP52788 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21■□□□□ 0.95
SMSP52788 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SMSP52788 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SMSP52788 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
SMSP52788 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMSP52788 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMSP52788 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMSP52788 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMSP52788 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMSP52788 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.99■□□□□ 0.95
SMSP52788 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMSP52788 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.99■□□□□ 0.95
SMSP52788 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.99■□□□□ 0.95
SMSP52788 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMSP52788 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMSP52788 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMSP52788 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMSP52788 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.98■□□□□ 0.95
SMSP52788 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.98■□□□□ 0.95
SMSP52788 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.98■□□□□ 0.95
SMSP52788 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.98■□□□□ 0.95
SMSP52788 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.98■□□□□ 0.95
SMSP52788 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMSP52788 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMSP52788 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMSP52788 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMSP52788 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.97■□□□□ 0.95
SMSP52788 AC133561.4-201ENST00000566112 224 ntBASIC20.97■□□□□ 0.95
SMSP52788 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SMSP52788 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.97■□□□□ 0.95
SMSP52788 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMSP52788 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.97■□□□□ 0.95
SMSP52788 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMSP52788 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMSP52788 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMSP52788 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SMSP52788 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMSP52788 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMSP52788 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.96■□□□□ 0.95
SMSP52788 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.96■□□□□ 0.95
SMSP52788 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMSP52788 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.96■□□□□ 0.95
SMSP52788 C9orf163-202ENST00000624034 2573 ntBASIC20.95■□□□□ 0.95
SMSP52788 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SMSP52788 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms