Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NR4A1P22736 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NR4A1P22736 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
NR4A1P22736 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NR4A1P22736 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.8■□□□□ 0.92
NR4A1P22736 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NR4A1P22736 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NR4A1P22736 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
NR4A1P22736 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NR4A1P22736 AC137767.1-201ENST00000602918 1920 ntBASIC20.8■□□□□ 0.92
NR4A1P22736 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NR4A1P22736 HLA-L-211ENST00000482052 1765 ntBASIC20.8■□□□□ 0.92
NR4A1P22736 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NR4A1P22736 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR4A1P22736 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NR4A1P22736 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR4A1P22736 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR4A1P22736 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.79■□□□□ 0.92
NR4A1P22736 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR4A1P22736 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NR4A1P22736 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NR4A1P22736 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.79■□□□□ 0.92
NR4A1P22736 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NR4A1P22736 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.78■□□□□ 0.92
NR4A1P22736 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.78■□□□□ 0.92
NR4A1P22736 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.78■□□□□ 0.92
NR4A1P22736 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.78■□□□□ 0.92
NR4A1P22736 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NR4A1P22736 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
NR4A1P22736 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.77■□□□□ 0.92
NR4A1P22736 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 KRT18P10-201ENST00000388836 1287 ntBASIC20.77■□□□□ 0.92
NR4A1P22736 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.77■□□□□ 0.92
NR4A1P22736 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.77■□□□□ 0.92
NR4A1P22736 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NR4A1P22736 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NR4A1P22736 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NR4A1P22736 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR4A1P22736 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR4A1P22736 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NR4A1P22736 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.76■□□□□ 0.91
NR4A1P22736 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NR4A1P22736 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NR4A1P22736 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NR4A1P22736 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
NR4A1P22736 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.76■□□□□ 0.91
NR4A1P22736 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.76■□□□□ 0.91
NR4A1P22736 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NR4A1P22736 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR4A1P22736 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NR4A1P22736 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NR4A1P22736 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
NR4A1P22736 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NR4A1P22736 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NR4A1P22736 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
NR4A1P22736 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NR4A1P22736 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.75■□□□□ 0.91
NR4A1P22736 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.75■□□□□ 0.91
NR4A1P22736 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.75■□□□□ 0.91
NR4A1P22736 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR4A1P22736 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR4A1P22736 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NR4A1P22736 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.75■□□□□ 0.91
NR4A1P22736 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NR4A1P22736 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.74■□□□□ 0.91
NR4A1P22736 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NR4A1P22736 MIR6089-201ENST00000616698 64 ntBASIC20.74■□□□□ 0.91
NR4A1P22736 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.74■□□□□ 0.91
NR4A1P22736 AC127496.7-201ENST00000625110 1798 ntBASIC20.74■□□□□ 0.91
NR4A1P22736 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.74■□□□□ 0.91
NR4A1P22736 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NR4A1P22736 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NR4A1P22736 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR4A1P22736 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR4A1P22736 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NR4A1P22736 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NR4A1P22736 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms