Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLUP10909 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLUP10909 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.31■□□□□ 0.84
CLUP10909 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.31■□□□□ 0.84
CLUP10909 AC011551.1-201ENST00000614101 683 ntBASIC20.31■□□□□ 0.84
CLUP10909 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.31■□□□□ 0.84
CLUP10909 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLUP10909 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLUP10909 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLUP10909 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLUP10909 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.3■□□□□ 0.84
CLUP10909 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.3■□□□□ 0.84
CLUP10909 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CLUP10909 ALDH1A3-203ENST00000557963 1670 ntBASIC20.3■□□□□ 0.84
CLUP10909 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLUP10909 EP400NL-214ENST00000641289 2402 ntBASIC20.3■□□□□ 0.84
CLUP10909 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.3■□□□□ 0.84
CLUP10909 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLUP10909 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.29■□□□□ 0.84
CLUP10909 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.29■□□□□ 0.84
CLUP10909 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLUP10909 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLUP10909 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLUP10909 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLUP10909 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLUP10909 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.28■□□□□ 0.84
CLUP10909 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLUP10909 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLUP10909 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLUP10909 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLUP10909 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLUP10909 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
CLUP10909 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.28■□□□□ 0.84
CLUP10909 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.28■□□□□ 0.84
CLUP10909 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLUP10909 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLUP10909 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLUP10909 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLUP10909 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CLUP10909 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLUP10909 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLUP10909 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.27■□□□□ 0.84
CLUP10909 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLUP10909 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLUP10909 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.27■□□□□ 0.84
CLUP10909 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
CLUP10909 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLUP10909 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.27■□□□□ 0.84
CLUP10909 AC139795.1-202ENST00000500444 432 ntBASIC20.27■□□□□ 0.84
CLUP10909 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLUP10909 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLUP10909 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLUP10909 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.27■□□□□ 0.83
CLUP10909 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.26■□□□□ 0.83
CLUP10909 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLUP10909 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLUP10909 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLUP10909 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLUP10909 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.26■□□□□ 0.83
CLUP10909 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLUP10909 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLUP10909 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLUP10909 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLUP10909 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLUP10909 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLUP10909 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLUP10909 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLUP10909 AC019171.1-201ENST00000601251 1056 ntBASIC20.25■□□□□ 0.83
CLUP10909 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CLUP10909 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLUP10909 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLUP10909 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.24■□□□□ 0.83
CLUP10909 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.24■□□□□ 0.83
CLUP10909 ABHD17AP5-201ENST00000580133 923 ntBASIC20.24■□□□□ 0.83
CLUP10909 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLUP10909 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms