Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSBP07858 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSBP07858 AC024257.2-201ENST00000549699 147 ntBASIC21.52■■□□□ 1.04
CTSBP07858 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTSBP07858 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTSBP07858 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTSBP07858 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTSBP07858 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.52■■□□□ 1.03
CTSBP07858 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CTSBP07858 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.51■■□□□ 1.03
CTSBP07858 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CTSBP07858 AC106739.1-201ENST00000617035 715 ntBASIC21.51■■□□□ 1.03
CTSBP07858 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTSBP07858 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
CTSBP07858 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CTSBP07858 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CTSBP07858 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTSBP07858 SERBP1P1-201ENST00000396021 1160 ntBASIC21.5■■□□□ 1.03
CTSBP07858 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.5■■□□□ 1.03
CTSBP07858 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTSBP07858 AC005837.3-201ENST00000612163 286 ntBASIC21.5■■□□□ 1.03
CTSBP07858 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTSBP07858 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTSBP07858 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CTSBP07858 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTSBP07858 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTSBP07858 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTSBP07858 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
CTSBP07858 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.49■■□□□ 1.03
CTSBP07858 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTSBP07858 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTSBP07858 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTSBP07858 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTSBP07858 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.48■■□□□ 1.03
CTSBP07858 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTSBP07858 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTSBP07858 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.48■■□□□ 1.03
CTSBP07858 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.48■■□□□ 1.03
CTSBP07858 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTSBP07858 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTSBP07858 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTSBP07858 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CTSBP07858 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTSBP07858 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.48■■□□□ 1.03
CTSBP07858 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.48■■□□□ 1.03
CTSBP07858 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.48■■□□□ 1.03
CTSBP07858 AL031432.3-201ENST00000607698 485 ntBASIC21.48■■□□□ 1.03
CTSBP07858 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CTSBP07858 AC135279.3-201ENST00000610945 1311 ntBASIC21.48■■□□□ 1.03
CTSBP07858 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.48■■□□□ 1.03
CTSBP07858 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.47■■□□□ 1.03
CTSBP07858 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CTSBP07858 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.47■■□□□ 1.03
CTSBP07858 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CTSBP07858 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTSBP07858 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTSBP07858 SYT6-210ENST00000641643 1587 ntBASIC21.46■■□□□ 1.03
CTSBP07858 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CTSBP07858 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.46■■□□□ 1.03
CTSBP07858 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.46■■□□□ 1.03
CTSBP07858 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.46■■□□□ 1.03
CTSBP07858 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTSBP07858 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTSBP07858 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTSBP07858 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTSBP07858 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CTSBP07858 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.45■■□□□ 1.03
CTSBP07858 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.45■■□□□ 1.02
CTSBP07858 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTSBP07858 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTSBP07858 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTSBP07858 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
CTSBP07858 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CTSBP07858 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.45■■□□□ 1.02
CTSBP07858 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.45■■□□□ 1.02
CTSBP07858 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CTSBP07858 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTSBP07858 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTSBP07858 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTSBP07858 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.44■■□□□ 1.02
CTSBP07858 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.44■■□□□ 1.02
CTSBP07858 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTSBP07858 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.43■■□□□ 1.02
CTSBP07858 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms