Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN9O75954 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TSPAN9O75954 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN9O75954 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TSPAN9O75954 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TSPAN9O75954 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 AC009299.2-201ENST00000482477 511 ntBASIC19.21■□□□□ 0.67
TSPAN9O75954 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.21■□□□□ 0.67
TSPAN9O75954 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
TSPAN9O75954 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN9O75954 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TSPAN9O75954 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN9O75954 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN9O75954 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TSPAN9O75954 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN9O75954 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TSPAN9O75954 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN9O75954 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TSPAN9O75954 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN9O75954 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TSPAN9O75954 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN9O75954 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TSPAN9O75954 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 KRT18P10-201ENST00000388836 1287 ntBASIC19.19■□□□□ 0.66
TSPAN9O75954 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 AL139125.2-201ENST00000623134 1869 ntBASIC19.19■□□□□ 0.66
TSPAN9O75954 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.19■□□□□ 0.66
TSPAN9O75954 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.19■□□□□ 0.66
TSPAN9O75954 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.19■□□□□ 0.66
TSPAN9O75954 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TSPAN9O75954 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN9O75954 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TSPAN9O75954 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 RPS2P7-201ENST00000447334 885 ntBASIC19.18■□□□□ 0.66
TSPAN9O75954 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.18■□□□□ 0.66
TSPAN9O75954 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TSPAN9O75954 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN9O75954 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN9O75954 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.17■□□□□ 0.66
TSPAN9O75954 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TSPAN9O75954 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TSPAN9O75954 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN9O75954 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.17■□□□□ 0.66
TSPAN9O75954 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
TSPAN9O75954 AC010501.1-201ENST00000606270 1962 ntBASIC19.17■□□□□ 0.66
TSPAN9O75954 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN9O75954 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN9O75954 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN9O75954 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN9O75954 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TSPAN9O75954 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN9O75954 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TSPAN9O75954 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN9O75954 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN9O75954 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TSPAN9O75954 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN9O75954 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN9O75954 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN9O75954 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TSPAN9O75954 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN9O75954 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN9O75954 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN9O75954 AC103724.3-201ENST00000564481 992 ntBASIC19.15■□□□□ 0.66
TSPAN9O75954 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN9O75954 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TSPAN9O75954 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms