Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
UPK3AO75631 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK3AO75631 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK3AO75631 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3AO75631 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
UPK3AO75631 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3AO75631 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3AO75631 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3AO75631 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3AO75631 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3AO75631 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3AO75631 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.23■□□□□ 0.83
UPK3AO75631 UNC93B8-201ENST00000511903 705 ntBASIC20.23■□□□□ 0.83
UPK3AO75631 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.23■□□□□ 0.83
UPK3AO75631 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.23■□□□□ 0.83
UPK3AO75631 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UPK3AO75631 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
UPK3AO75631 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3AO75631 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3AO75631 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.22■□□□□ 0.83
UPK3AO75631 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK3AO75631 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3AO75631 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3AO75631 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UPK3AO75631 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UPK3AO75631 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UPK3AO75631 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.22■□□□□ 0.83
UPK3AO75631 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPK3AO75631 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.22■□□□□ 0.83
UPK3AO75631 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
UPK3AO75631 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.21■□□□□ 0.83
UPK3AO75631 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.21■□□□□ 0.83
UPK3AO75631 MTDHP2-201ENST00000601468 714 ntBASIC20.21■□□□□ 0.83
UPK3AO75631 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.21■□□□□ 0.83
UPK3AO75631 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK3AO75631 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UPK3AO75631 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
UPK3AO75631 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.2■□□□□ 0.82
UPK3AO75631 AC010997.5-201ENST00000609182 354 ntBASIC20.2■□□□□ 0.82
UPK3AO75631 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK3AO75631 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.2■□□□□ 0.82
UPK3AO75631 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.2■□□□□ 0.82
UPK3AO75631 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UPK3AO75631 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK3AO75631 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
UPK3AO75631 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK3AO75631 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK3AO75631 MIR6722-201ENST00000617286 78 ntBASIC20.19■□□□□ 0.82
UPK3AO75631 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.19■□□□□ 0.82
UPK3AO75631 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.19■□□□□ 0.82
UPK3AO75631 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK3AO75631 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK3AO75631 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK3AO75631 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK3AO75631 ALDH1A3-203ENST00000557963 1670 ntBASIC20.19■□□□□ 0.82
UPK3AO75631 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UPK3AO75631 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.19■□□□□ 0.82
UPK3AO75631 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
UPK3AO75631 ANOS2P-203ENST00000472227 1816 ntBASIC20.18■□□□□ 0.82
UPK3AO75631 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.18■□□□□ 0.82
UPK3AO75631 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK3AO75631 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.18■□□□□ 0.82
UPK3AO75631 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK3AO75631 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.18■□□□□ 0.82
UPK3AO75631 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.18■□□□□ 0.82
UPK3AO75631 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.18■□□□□ 0.82
UPK3AO75631 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.18■□□□□ 0.82
UPK3AO75631 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.18■□□□□ 0.82
UPK3AO75631 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK3AO75631 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK3AO75631 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK3AO75631 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.18■□□□□ 0.82
UPK3AO75631 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.18■□□□□ 0.82
UPK3AO75631 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.17■□□□□ 0.82
UPK3AO75631 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
UPK3AO75631 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.17■□□□□ 0.82
UPK3AO75631 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPK3AO75631 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.17■□□□□ 0.82
UPK3AO75631 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPK3AO75631 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.17■□□□□ 0.82
UPK3AO75631 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.17■□□□□ 0.82
UPK3AO75631 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UPK3AO75631 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.17■□□□□ 0.82
UPK3AO75631 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms