Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMEM88BA6NKF7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMEM88BA6NKF7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMEM88BA6NKF7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMEM88BA6NKF7 AC142086.2-201ENST00000569753 217 ntBASIC26.79■■□□□ 1.88
TMEM88BA6NKF7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.79■■□□□ 1.88
TMEM88BA6NKF7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.79■■□□□ 1.88
TMEM88BA6NKF7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMEM88BA6NKF7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 KRT18P6-201ENST00000555540 1265 ntBASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.78■■□□□ 1.88
TMEM88BA6NKF7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 MIR663A-201ENST00000385250 93 ntBASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMEM88BA6NKF7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TMEM88BA6NKF7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TMEM88BA6NKF7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TMEM88BA6NKF7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
TMEM88BA6NKF7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.75■■□□□ 1.87
TMEM88BA6NKF7 AC091060.1-201ENST00000623524 1766 ntBASIC26.75■■□□□ 1.87
TMEM88BA6NKF7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
TMEM88BA6NKF7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TMEM88BA6NKF7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
TMEM88BA6NKF7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM88BA6NKF7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM88BA6NKF7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.73■■□□□ 1.87
TMEM88BA6NKF7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.73■■□□□ 1.87
TMEM88BA6NKF7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.73■■□□□ 1.87
TMEM88BA6NKF7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TMEM88BA6NKF7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TMEM88BA6NKF7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 AL022069.1-201ENST00000568025 1636 ntBASIC26.71■■□□□ 1.87
TMEM88BA6NKF7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TMEM88BA6NKF7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
TMEM88BA6NKF7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
TMEM88BA6NKF7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
TMEM88BA6NKF7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.7■■□□□ 1.87
TMEM88BA6NKF7 AP004607.4-201ENST00000530158 1459 ntBASIC26.7■■□□□ 1.87
TMEM88BA6NKF7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
TMEM88BA6NKF7 FAM201B-201ENST00000458407 597 ntBASIC26.7■■□□□ 1.86
TMEM88BA6NKF7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.7■■□□□ 1.86
TMEM88BA6NKF7 AC105233.4-201ENST00000642045 216 ntBASIC26.7■■□□□ 1.86
TMEM88BA6NKF7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TMEM88BA6NKF7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.7■■□□□ 1.86
TMEM88BA6NKF7 AC141586.4-201ENST00000624558 1573 ntBASIC26.7■■□□□ 1.86
TMEM88BA6NKF7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms