Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSGN1A6NI15 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.69■□□□□ 0.58
MSGN1A6NI15 KRT18P60-201ENST00000312876 1297 ntBASIC18.69■□□□□ 0.58
MSGN1A6NI15 RPS2P7-201ENST00000447334 885 ntBASIC18.69■□□□□ 0.58
MSGN1A6NI15 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSGN1A6NI15 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSGN1A6NI15 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MSGN1A6NI15 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSGN1A6NI15 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSGN1A6NI15 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
MSGN1A6NI15 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSGN1A6NI15 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MSGN1A6NI15 AC092068.2-201ENST00000590491 1708 ntBASIC18.69■□□□□ 0.58
MSGN1A6NI15 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSGN1A6NI15 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSGN1A6NI15 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSGN1A6NI15 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 AC129492.7-201ENST00000622992 756 ntBASIC18.68■□□□□ 0.58
MSGN1A6NI15 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSGN1A6NI15 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.68■□□□□ 0.58
MSGN1A6NI15 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSGN1A6NI15 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSGN1A6NI15 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MSGN1A6NI15 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MSGN1A6NI15 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.67■□□□□ 0.58
MSGN1A6NI15 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.67■□□□□ 0.58
MSGN1A6NI15 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MSGN1A6NI15 NTF6A-201ENST00000591175 560 ntBASIC18.67■□□□□ 0.58
MSGN1A6NI15 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
MSGN1A6NI15 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSGN1A6NI15 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MSGN1A6NI15 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSGN1A6NI15 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.66■□□□□ 0.58
MSGN1A6NI15 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSGN1A6NI15 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSGN1A6NI15 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSGN1A6NI15 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSGN1A6NI15 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSGN1A6NI15 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.66■□□□□ 0.58
MSGN1A6NI15 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSGN1A6NI15 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.66■□□□□ 0.58
MSGN1A6NI15 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
MSGN1A6NI15 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.66■□□□□ 0.58
MSGN1A6NI15 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
MSGN1A6NI15 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSGN1A6NI15 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MSGN1A6NI15 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSGN1A6NI15 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.65■□□□□ 0.58
MSGN1A6NI15 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.65■□□□□ 0.58
MSGN1A6NI15 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSGN1A6NI15 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MSGN1A6NI15 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MSGN1A6NI15 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.64■□□□□ 0.57
MSGN1A6NI15 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
MSGN1A6NI15 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 AC087393.1-201ENST00000582896 145 ntBASIC18.64■□□□□ 0.57
MSGN1A6NI15 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.64■□□□□ 0.57
MSGN1A6NI15 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.64■□□□□ 0.57
MSGN1A6NI15 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSGN1A6NI15 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.64■□□□□ 0.57
MSGN1A6NI15 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSGN1A6NI15 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSGN1A6NI15 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MSGN1A6NI15 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSGN1A6NI15 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSGN1A6NI15 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSGN1A6NI15 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms