Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.05■□□□□ 0.8
NKX2-6A6NCS4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NKX2-6A6NCS4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
NKX2-6A6NCS4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NKX2-6A6NCS4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-6A6NCS4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-6A6NCS4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 AC241377.3-202ENST00000626088 1088 ntBASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 AC241585.3-202ENST00000628937 1088 ntBASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 AC245100.8-202ENST00000629247 1058 ntBASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-6A6NCS4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 MIR6089-201ENST00000616698 64 ntBASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 AC136469.2-201ENST00000623944 1028 ntBASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-6A6NCS4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-6A6NCS4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-6A6NCS4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.02■□□□□ 0.8
NKX2-6A6NCS4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-6A6NCS4 AC009086.3-201ENST00000623486 1008 ntBASIC20.02■□□□□ 0.8
NKX2-6A6NCS4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
NKX2-6A6NCS4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NKX2-6A6NCS4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NKX2-6A6NCS4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NKX2-6A6NCS4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.02■□□□□ 0.79
NKX2-6A6NCS4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NKX2-6A6NCS4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-6A6NCS4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-6A6NCS4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NKX2-6A6NCS4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20■□□□□ 0.79
NKX2-6A6NCS4 AC233992.3-201ENST00000607491 485 ntBASIC20■□□□□ 0.79
NKX2-6A6NCS4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 MIR3181-201ENST00000578512 73 ntBASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NKX2-6A6NCS4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-6A6NCS4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-6A6NCS4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 BX842568.3-201ENST00000418104 571 ntBASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-6A6NCS4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.95■□□□□ 0.78
NKX2-6A6NCS4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms