Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TCRBV3S1A0A5B6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TCRBV3S1A0A5B6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 C11orf96-202ENST00000528572 1834 ntBASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV3S1A0A5B6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 AC026202.3-201ENST00000600805 1127 ntBASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV3S1A0A5B6 AC092053.2-201ENST00000640557 1818 ntBASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 RPS2P35-201ENST00000443417 897 ntBASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV3S1A0A5B6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.19■□□□□ 0.98
TCRBV3S1A0A5B6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 AL022069.1-201ENST00000568025 1636 ntBASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV3S1A0A5B6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 AC007029.1-201ENST00000604183 313 ntBASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV3S1A0A5B6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.16■□□□□ 0.98
TCRBV3S1A0A5B6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.15■□□□□ 0.98
TCRBV3S1A0A5B6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV3S1A0A5B6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TCRBV3S1A0A5B6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV3S1A0A5B6 AC016575.1-201ENST00000607026 382 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms