Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM238LA0A1B0GVL6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM238LA0A1B0GVL6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM238LA0A1B0GVL6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM238LA0A1B0GVL6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM238LA0A1B0GVL6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM238LA0A1B0GVL6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM238LA0A1B0GVL6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM238LA0A1B0GVL6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM238LA0A1B0GVL6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM238LA0A1B0GVL6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 AL137060.1-201ENST00000618151 2648 ntBASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TMEM238LA0A1B0GVL6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM238LA0A1B0GVL6 SLC6A10P-202ENST00000431994 2058 ntBASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM238LA0A1B0GVL6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM238LA0A1B0GVL6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 HCG11-201ENST00000411553 5696 ntBASIC15.73■□□□□ 0.11
TMEM238LA0A1B0GVL6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms