Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 AC110285.6-201ENST00000617652 491 ntBASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.28■□□□□ 0.2
IGHV4-28A0A0C4DH34 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 AC092171.4-201ENST00000609130 632 ntBASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 C17orf82-201ENST00000623772 1530 ntBASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
IGHV4-28A0A0C4DH34 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
IGHV4-28A0A0C4DH34 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IGHV4-28A0A0C4DH34 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.27■□□□□ 0.19
IGHV4-28A0A0C4DH34 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
IGHV4-28A0A0C4DH34 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 UNC93B3-201ENST00000308076 687 ntBASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IGHV4-28A0A0C4DH34 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC099791.2-201ENST00000605725 427 ntBASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 AL136162.1-201ENST00000607711 1078 ntBASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IGHV4-28A0A0C4DH34 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC019069.1-201ENST00000610008 1333 ntBASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 MIR638-201ENST00000385237 100 ntBASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 PBX2P1-201ENST00000493219 1291 ntBASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 DUX4L19-201ENST00000557448 1267 ntBASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGHV4-28A0A0C4DH34 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 SYT6-210ENST00000641643 1587 ntBASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC241377.3-202ENST00000626088 1088 ntBASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC241585.3-202ENST00000628937 1088 ntBASIC16.23■□□□□ 0.19
IGHV4-28A0A0C4DH34 AC245100.8-202ENST00000629247 1058 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms