Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 RNF165-205ENST00000588679 2904 ntBASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 MIR3648-2-201ENST00000581792 180 ntBASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 MIR3648-1-201ENST00000615959 180 ntBASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 AC092068.2-201ENST00000590491 1708 ntBASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV34A0A0B4J273 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV34A0A0B4J273 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 RP9P-202ENST00000450133 1212 ntBASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV34A0A0B4J273 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV34A0A0B4J273 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV34A0A0B4J273 AC093536.1-201ENST00000569153 554 ntBASIC17.34■□□□□ 0.37
TRAV34A0A0B4J273 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV34A0A0B4J273 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV34A0A0B4J273 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV34A0A0B4J273 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV34A0A0B4J273 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV34A0A0B4J273 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.33■□□□□ 0.37
TRAV34A0A0B4J273 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV34A0A0B4J273 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV34A0A0B4J273 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV34A0A0B4J273 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV34A0A0B4J273 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV34A0A0B4J273 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV34A0A0B4J273 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV34A0A0B4J273 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV34A0A0B4J273 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV34A0A0B4J273 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 AC016575.1-201ENST00000607026 382 ntBASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV34A0A0B4J273 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV34A0A0B4J273 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms