Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV24A0A0B4J272 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 SNX5-217ENST00000606557 1087 ntBASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 AC137630.3-201ENST00000607245 391 ntBASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV24A0A0B4J272 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV24A0A0B4J272 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV24A0A0B4J272 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV24A0A0B4J272 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 AC079630.1-202ENST00000618127 1840 ntBASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV24A0A0B4J272 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV24A0A0B4J272 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRAV24A0A0B4J272 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV24A0A0B4J272 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV24A0A0B4J272 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms