Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV5A0A0B4J1U4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 AP001330.3-201ENST00000520123 633 ntBASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 AL136967.2-201ENST00000623968 743 ntBASIC20.33■□□□□ 0.85
TRGV5A0A0B4J1U4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRGV5A0A0B4J1U4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRGV5A0A0B4J1U4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRGV5A0A0B4J1U4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRGV5A0A0B4J1U4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 MIR939-201ENST00000401314 82 ntBASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 AC141586.4-201ENST00000624558 1573 ntBASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV5A0A0B4J1U4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 ZNRF2P3-201ENST00000424200 374 ntBASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 AC091305.1-201ENST00000479476 895 ntBASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 MIR3181-201ENST00000578512 73 ntBASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 AC136469.2-201ENST00000623944 1028 ntBASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV5A0A0B4J1U4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV5A0A0B4J1U4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 pRNA.6-201ENST00000610482 90 ntBASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 pRNA.5-201ENST00000612139 90 ntBASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 pRNA.11-201ENST00000618423 90 ntBASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 pRNA.13-201ENST00000619112 90 ntBASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRGV5A0A0B4J1U4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 AC105265.2-201ENST00000467189 838 ntBASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 AC027682.1-201ENST00000562846 899 ntBASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV5A0A0B4J1U4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 RASA4CP-201ENST00000424092 1398 ntBASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 AC008764.7-201ENST00000593779 1081 ntBASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.27■□□□□ 0.84
TRGV5A0A0B4J1U4 LINC01124-201ENST00000409786 2117 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms