Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TRAV8-3A0A0A6YYJ7 EP400NL-214ENST00000641289 2402 ntBASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 FOXO3B-201ENST00000395675 1928 ntBASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 AC233723.2-201ENST00000623798 2106 ntBASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 YBX1P4-201ENST00000392794 808 ntBASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 AC010980.1-201ENST00000587192 1142 ntBASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 LINC00565-201ENST00000562710 2331 ntBASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 MIR6089-201ENST00000616698 64 ntBASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV8-3A0A0A6YYJ7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms