Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 MSNP1-201ENST00000511640 1732 ntBASIC16.03■□□□□ 0.16
CBX8Q9HC52 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 SALL4P6-201ENST00000429385 1691 ntBASIC16.03■□□□□ 0.16
CBX8Q9HC52 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 DMBT1P1-203ENST00000636837 4628 ntBASIC16.03■□□□□ 0.16
CBX8Q9HC52 AMT-221ENST00000538581 2038 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.03■□□□□ 0.16
CBX8Q9HC52 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 ELK1P1-201ENST00000485699 580 ntBASIC16.03■□□□□ 0.16
CBX8Q9HC52 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 MIR4683-201ENST00000579659 81 ntBASIC16.03■□□□□ 0.16
CBX8Q9HC52 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 CR392039.2-201ENST00000623182 509 ntBASIC16.03■□□□□ 0.16
CBX8Q9HC52 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX8Q9HC52 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX8Q9HC52 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 PMS2P2-201ENST00000425039 1128 ntBASIC16.02■□□□□ 0.16
CBX8Q9HC52 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.02■□□□□ 0.16
CBX8Q9HC52 AC106028.4-201ENST00000614509 607 ntBASIC16.02■□□□□ 0.16
CBX8Q9HC52 AC093512.1-201ENST00000617969 520 ntBASIC16.02■□□□□ 0.16
CBX8Q9HC52 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX8Q9HC52 AC002472.3-201ENST00000640124 621 ntBASIC16.02■□□□□ 0.16
CBX8Q9HC52 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
CBX8Q9HC52 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 AC007326.2-201ENST00000624224 7579 ntBASIC16.02■□□□□ 0.15
CBX8Q9HC52 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CBX8Q9HC52 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CBX8Q9HC52 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.02■□□□□ 0.15
CBX8Q9HC52 AC102953.2-201ENST00000609755 3026 ntBASIC16.02■□□□□ 0.15
CBX8Q9HC52 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
CBX8Q9HC52 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX8Q9HC52 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms