Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CMSS1Q9BQ75 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 PCDHB18P-202ENST00000526308 3197 ntBASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 VENTXP1-201ENST00000569334 2716 ntBASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 DFFBP1-201ENST00000433250 979 ntBASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AC245100.3-201ENST00000441281 285 ntBASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AC106028.4-201ENST00000614509 607 ntBASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AC020910.5-201ENST00000623668 1865 ntBASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CMSS1Q9BQ75 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AL365181.3-201ENST00000605886 3222 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 MYCLP2-201ENST00000449268 967 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 MESTP3-201ENST00000503460 968 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 TMEM261P1-201ENST00000604899 340 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 BX088702.1-201ENST00000610784 235 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC009118.2-201ENST00000613275 655 ntBASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMSS1Q9BQ75 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms