Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDLIM5Q96HC4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PDLIM5Q96HC4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDLIM5Q96HC4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDLIM5Q96HC4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PDLIM5Q96HC4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDLIM5Q96HC4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PDLIM5Q96HC4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.96□□□□□ -0.18
PDLIM5Q96HC4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 MARK2P5-201ENST00000507649 634 ntBASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 AC135782.3-201ENST00000562782 2105 ntBASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 MIR3615-201ENST00000581999 87 ntBASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 MIR3188-201ENST00000583494 85 ntBASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 AC018735.1-201ENST00000437208 1502 ntBASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDLIM5Q96HC4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 ABCD1P2-201ENST00000429313 1601 ntBASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 TSPY25P-201ENST00000429463 745 ntBASIC13.94□□□□□ -0.18
PDLIM5Q96HC4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms