Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARHGEF40Q8TER5 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 CLK2P1-201ENST00000416636 1294 ntBASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 AC012513.2-201ENST00000441511 1137 ntBASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 TULP3P1-202ENST00000453253 1291 ntBASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 AL158032.2-201ENST00000616818 195 ntBASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ARHGEF40Q8TER5 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF40Q8TER5 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AC005077.3-201ENST00000449614 213 ntBASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 TPT1P11-201ENST00000458482 498 ntBASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 HNRNPA1P11-201ENST00000580106 956 ntBASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 POLR3DP1-201ENST00000398689 1176 ntBASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 HMGN1P4-201ENST00000419500 290 ntBASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 AC090616.6-202ENST00000583601 1088 ntBASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF40Q8TER5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 MARCKSL1P2-201ENST00000401037 976 ntBASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 KRT18P8-201ENST00000581937 1246 ntBASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 AC099795.2-201ENST00000639582 440 ntBASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF40Q8TER5 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms