Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 AC244394.1-201ENST00000435000 1665 ntBASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 KRT17P8-201ENST00000540749 863 ntBASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 DUX4L46-201ENST00000566845 751 ntBASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 AC072061.1-201ENST00000569710 2234 ntBASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 MIR497HG-202ENST00000572453 3838 ntBASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 MIR6720-201ENST00000611664 98 ntBASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00346Q8IVM7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AL023775.1-201ENST00000454907 1746 ntBASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AL645933.1-201ENST00000440087 609 ntBASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 AC023310.1-201ENST00000554836 735 ntBASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 RBM8B-201ENST00000555532 525 ntBASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00346Q8IVM7 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 AL928654.5-201ENST00000624831 2501 ntBASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00346Q8IVM7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms