Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
EFNB1P98172 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
EFNB1P98172 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.78□□□□□ -0.36
EFNB1P98172 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
EFNB1P98172 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
EFNB1P98172 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB1P98172 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB1P98172 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB1P98172 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
EFNB1P98172 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
EFNB1P98172 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
EFNB1P98172 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB1P98172 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB1P98172 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
EFNB1P98172 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
EFNB1P98172 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
EFNB1P98172 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 AC006001.1-201ENST00000325130 474 ntBASIC12.77□□□□□ -0.37
EFNB1P98172 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.77□□□□□ -0.37
EFNB1P98172 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB1P98172 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.77□□□□□ -0.37
EFNB1P98172 AC078819.1-201ENST00000547454 765 ntBASIC12.77□□□□□ -0.37
EFNB1P98172 AC012085.1-201ENST00000548270 765 ntBASIC12.77□□□□□ -0.37
EFNB1P98172 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB1P98172 MIR4783-201ENST00000580343 82 ntBASIC12.77□□□□□ -0.37
EFNB1P98172 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
EFNB1P98172 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB1P98172 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB1P98172 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB1P98172 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.77□□□□□ -0.37
EFNB1P98172 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
EFNB1P98172 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
EFNB1P98172 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 E2F3P2-201ENST00000447755 1422 ntBASIC12.77□□□□□ -0.37
EFNB1P98172 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
EFNB1P98172 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 KRT8P4-201ENST00000509735 1454 ntBASIC12.77□□□□□ -0.37
EFNB1P98172 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.77□□□□□ -0.37
EFNB1P98172 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
EFNB1P98172 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB1P98172 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 ZNF493-208ENST00000599461 1769 ntBASIC12.76□□□□□ -0.37
EFNB1P98172 Z98885.3-201ENST00000624882 1757 ntBASIC12.76□□□□□ -0.37
EFNB1P98172 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
EFNB1P98172 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB1P98172 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB1P98172 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 AL022323.5-201ENST00000624101 2059 ntBASIC12.76□□□□□ -0.37
EFNB1P98172 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
EFNB1P98172 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
EFNB1P98172 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
EFNB1P98172 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB1P98172 PIN1P1-201ENST00000412108 996 ntBASIC12.76□□□□□ -0.37
EFNB1P98172 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
EFNB1P98172 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB1P98172 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB1P98172 AL355864.2-201ENST00000447420 863 ntBASIC12.76□□□□□ -0.37
EFNB1P98172 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
EFNB1P98172 AL355994.2-201ENST00000447882 704 ntBASIC12.76□□□□□ -0.37
EFNB1P98172 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.76□□□□□ -0.37
EFNB1P98172 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.76□□□□□ -0.37
EFNB1P98172 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms