Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TCAM1P-207ENST00000485295 1537 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GFRA1P56159 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 AC017007.3-201ENST00000479865 435 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 GOLGA2P8-201ENST00000505201 779 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 AC005740.1-201ENST00000515639 522 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
GFRA1P56159 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.79□□□□□ -0.36
GFRA1P56159 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.79□□□□□ -0.36
GFRA1P56159 AL133467.4-201ENST00000602953 725 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 AC005632.3-201ENST00000605544 308 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 AL590824.1-201ENST00000403828 1349 ntBASIC12.79□□□□□ -0.36
GFRA1P56159 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.79□□□□□ -0.36
GFRA1P56159 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.79□□□□□ -0.36
GFRA1P56159 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GFRA1P56159 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.78□□□□□ -0.36
GFRA1P56159 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
GFRA1P56159 AC130709.1-201ENST00000484779 1212 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 RPL18AP8-201ENST00000486071 528 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.78□□□□□ -0.36
GFRA1P56159 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.78□□□□□ -0.36
GFRA1P56159 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.78□□□□□ -0.36
GFRA1P56159 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.78□□□□□ -0.36
GFRA1P56159 RN7SL665P-201ENST00000578793 300 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 MIR4522-201ENST00000584932 87 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 AC138894.2-201ENST00000602838 371 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 AL021707.6-201ENST00000609212 491 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
GFRA1P56159 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 AC023908.3-201ENST00000564211 3047 ntBASIC12.78□□□□□ -0.36
GFRA1P56159 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
GFRA1P56159 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GFRA1P56159 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
GFRA1P56159 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms