Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH8P55286 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH8P55286 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 POU5F1P2-201ENST00000521750 823 ntBASIC15.26■□□□□ 0.03
CDH8P55286 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH8P55286 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH8P55286 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH8P55286 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH8P55286 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH8P55286 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH8P55286 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH8P55286 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH8P55286 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH8P55286 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 KRT17P5-201ENST00000332088 839 ntBASIC15.25■□□□□ 0.03
CDH8P55286 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH8P55286 ELK2AP-201ENST00000392510 1007 ntBASIC15.25■□□□□ 0.03
CDH8P55286 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 BANF1P3-201ENST00000412556 261 ntBASIC15.25■□□□□ 0.03
CDH8P55286 AC006335.1-201ENST00000445200 547 ntBASIC15.25■□□□□ 0.03
CDH8P55286 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH8P55286 ALG1L13P-202ENST00000519320 584 ntBASIC15.25■□□□□ 0.03
CDH8P55286 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH8P55286 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 CU633904.3-201ENST00000624042 1029 ntBASIC15.25■□□□□ 0.03
CDH8P55286 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH8P55286 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 ST20-AS1-201ENST00000560255 4223 ntBASIC15.25■□□□□ 0.03
CDH8P55286 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CDH8P55286 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH8P55286 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH8P55286 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH8P55286 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH8P55286 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH8P55286 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms