Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.68□□□□□ -0.38
CX3CR1P49238 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.68□□□□□ -0.38
CX3CR1P49238 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.68□□□□□ -0.38
CX3CR1P49238 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CX3CR1P49238 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 AC023794.5-201ENST00000564380 2157 ntBASIC12.67□□□□□ -0.38
CX3CR1P49238 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 CNN2P10-201ENST00000443067 918 ntBASIC12.67□□□□□ -0.38
CX3CR1P49238 HIST2H2BB-201ENST00000449108 381 ntBASIC12.67□□□□□ -0.38
CX3CR1P49238 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.67□□□□□ -0.38
CX3CR1P49238 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.67□□□□□ -0.38
CX3CR1P49238 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.67□□□□□ -0.38
CX3CR1P49238 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.67□□□□□ -0.38
CX3CR1P49238 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.67□□□□□ -0.38
CX3CR1P49238 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CX3CR1P49238 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CX3CR1P49238 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CX3CR1P49238 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.66□□□□□ -0.38
CX3CR1P49238 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.66□□□□□ -0.38
CX3CR1P49238 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.66□□□□□ -0.38
CX3CR1P49238 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.66□□□□□ -0.38
CX3CR1P49238 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.66□□□□□ -0.38
CX3CR1P49238 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.66□□□□□ -0.38
CX3CR1P49238 E2F3P2-201ENST00000447755 1422 ntBASIC12.66□□□□□ -0.38
CX3CR1P49238 AC015909.5-201ENST00000624336 2266 ntBASIC12.66□□□□□ -0.38
CX3CR1P49238 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.66□□□□□ -0.38
CX3CR1P49238 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.66□□□□□ -0.38
CX3CR1P49238 RPL7P3-201ENST00000441388 714 ntBASIC12.66□□□□□ -0.38
CX3CR1P49238 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 CROCCP4-201ENST00000457096 498 ntBASIC12.66□□□□□ -0.38
CX3CR1P49238 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CX3CR1P49238 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.66□□□□□ -0.38
CX3CR1P49238 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CX3CR1P49238 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.66□□□□□ -0.38
CX3CR1P49238 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CX3CR1P49238 AP000812.2-201ENST00000538934 718 ntBASIC12.66□□□□□ -0.38
CX3CR1P49238 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms