Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VARSP26640 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VARSP26640 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
VARSP26640 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 KRT8P4-201ENST00000509735 1454 ntBASIC14.25□□□□□ -0.13
VARSP26640 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
VARSP26640 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.25□□□□□ -0.13
VARSP26640 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 AC026954.1-201ENST00000429771 1293 ntBASIC14.25□□□□□ -0.13
VARSP26640 CALR4P-201ENST00000431943 946 ntBASIC14.25□□□□□ -0.13
VARSP26640 RPL13AP20-201ENST00000459725 609 ntBASIC14.25□□□□□ -0.13
VARSP26640 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.25□□□□□ -0.13
VARSP26640 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.25□□□□□ -0.13
VARSP26640 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.25□□□□□ -0.13
VARSP26640 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.25□□□□□ -0.13
VARSP26640 AC108673.2-201ENST00000608909 565 ntBASIC14.25□□□□□ -0.13
VARSP26640 BX088702.1-201ENST00000610784 235 ntBASIC14.25□□□□□ -0.13
VARSP26640 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
VARSP26640 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.25□□□□□ -0.13
VARSP26640 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.25□□□□□ -0.13
VARSP26640 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 AC020910.6-201ENST00000623084 1459 ntBASIC14.25□□□□□ -0.13
VARSP26640 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VARSP26640 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.24□□□□□ -0.13
VARSP26640 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 AHCYP2-201ENST00000430630 1300 ntBASIC14.24□□□□□ -0.13
VARSP26640 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.24□□□□□ -0.13
VARSP26640 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VARSP26640 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VARSP26640 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 PUDPP3-201ENST00000445368 636 ntBASIC14.24□□□□□ -0.13
VARSP26640 Z93015.1-201ENST00000451718 390 ntBASIC14.24□□□□□ -0.13
VARSP26640 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.24□□□□□ -0.13
VARSP26640 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.24□□□□□ -0.13
VARSP26640 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 AC103988.2-201ENST00000561804 725 ntBASIC14.24□□□□□ -0.13
VARSP26640 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.24□□□□□ -0.13
VARSP26640 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VARSP26640 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
VARSP26640 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VARSP26640 AC139712.1-201ENST00000378256 1875 ntBASIC14.24□□□□□ -0.13
VARSP26640 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VARSP26640 AC215219.1-201ENST00000400706 1817 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 306.3 ms