Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.74□□□□□ -1.495e-7■■□□□ 12
U2AF2P26368 SEC31A-239ENST00000514362 617 ntTSL 31.65□□□□□ -2.153e-12■■□□□ 12
U2AF2P26368 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC13.4□□□□□ -0.277e-7■■□□□ 12
U2AF2P26368 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.14□□□□□ -1.111e-9■■□□□ 12
U2AF2P26368 SLC13A3-207ENST00000450298 707 ntTSL 36.94□□□□□ -1.31e-10■■□□□ 12
U2AF2P26368 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.74□□□□□ -1.974e-7■■□□□ 12
U2AF2P26368 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.043e-7■■□□□ 12
U2AF2P26368 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.113e-7■■□□□ 12
U2AF2P26368 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.386e-12■■□□□ 12
U2AF2P26368 TRIP6-206ENST00000476870 1750 ntTSL 221.74■■□□□ 1.076e-12■■□□□ 12
U2AF2P26368 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.69■□□□□ 0.586e-12■■□□□ 12
U2AF2P26368 TRIP6-203ENST00000429658 646 ntTSL 317.42■□□□□ 0.386e-12■■□□□ 12
U2AF2P26368 TRIP6-207ENST00000488670 615 ntTSL 316.31■□□□□ 0.26e-12■■□□□ 12
U2AF2P26368 C3-207ENST00000596238 563 ntTSL 28.39□□□□□ -1.074e-18■■□□□ 11.9
U2AF2P26368 SETD5-224ENST00000486465 886 ntTSL 212.85□□□□□ -0.355e-12■■□□□ 11.9
U2AF2P26368 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.94e-9■■□□□ 11.9
U2AF2P26368 NUDT4-207ENST00000550056 531 ntTSL 418.18■□□□□ 0.54e-9■■□□□ 11.9
U2AF2P26368 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.184e-9■■□□□ 11.9
U2AF2P26368 NUDT4-203ENST00000546925 569 ntTSL 413.36□□□□□ -0.274e-9■■□□□ 11.9
U2AF2P26368 NUDT4-204ENST00000547014 1419 ntTSL 2 BASIC12.08□□□□□ -0.484e-9■■□□□ 11.9
U2AF2P26368 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC10.09□□□□□ -0.794e-9■■□□□ 11.9
U2AF2P26368 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC9.49□□□□□ -0.894e-9■■□□□ 11.9
U2AF2P26368 TM9SF3-205ENST00000485093 407 ntTSL 54.79□□□□□ -1.645e-8■■□□□ 11.9
U2AF2P26368 CDC27-214ENST00000573502 888 ntTSL 53.09□□□□□ -1.911e-7■■□□□ 11.9
U2AF2P26368 LUC7L3-217ENST00000510984 505 ntTSL 317.78■□□□□ 0.441e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-212ENST00000508045 1112 ntTSL 1 (best)16.73■□□□□ 0.271e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-206ENST00000504563 840 ntTSL 516■□□□□ 0.151e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-213ENST00000508218 533 ntTSL 214.43□□□□□ -0.11e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-207ENST00000505619 658 ntTSL 314.39□□□□□ -0.111e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-215ENST00000509335 582 ntTSL 213.99□□□□□ -0.171e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-221ENST00000513025 594 ntTSL 35.5□□□□□ -1.531e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-211ENST00000507503 561 ntTSL 24.33□□□□□ -1.721e-10■■□□□ 11.9
U2AF2P26368 LUC7L3-210ENST00000507200 510 ntTSL 43.03□□□□□ -1.921e-10■■□□□ 11.9
U2AF2P26368 ACSL4-206ENST00000502391 802 ntTSL 323.2■■□□□ 1.34e-7■■□□□ 11.9
U2AF2P26368 ACSL4-211ENST00000508092 637 ntTSL 421.31■■□□□ 14e-7■■□□□ 11.9
U2AF2P26368 ACSL4-208ENST00000504980 573 ntTSL 418.56■□□□□ 0.564e-7■■□□□ 11.9
U2AF2P26368 ACSL4-205ENST00000469857 506 ntTSL 1 (best)12.09□□□□□ -0.474e-7■■□□□ 11.9
U2AF2P26368 MFSD8-204ENST00000505284 1724 ntTSL 218.11■□□□□ 0.499e-7■■□□□ 11.9
U2AF2P26368 MFSD8-243ENST00000641695 1455 ntBASIC8.93□□□□□ -0.989e-7■■□□□ 11.9
U2AF2P26368 MFSD8-237ENST00000641538 747 nt8.89□□□□□ -0.999e-7■■□□□ 11.9
U2AF2P26368 MFSD8-221ENST00000641264 788 nt8.73□□□□□ -1.019e-7■■□□□ 11.9
U2AF2P26368 MFSD8-234ENST00000641503 1082 ntBASIC8.73□□□□□ -1.019e-7■■□□□ 11.9
U2AF2P26368 MFSD8-249ENST00000641776 673 nt8.73□□□□□ -1.019e-7■■□□□ 11.9
U2AF2P26368 MFSD8-225ENST00000641369 641 nt6.72□□□□□ -1.339e-7■■□□□ 11.9
U2AF2P26368 MFSD8-220ENST00000641243 1422 ntBASIC4.8□□□□□ -1.649e-7■■□□□ 11.9
U2AF2P26368 MFSD8-213ENST00000641134 1327 ntBASIC3.11□□□□□ -1.919e-7■■□□□ 11.9
U2AF2P26368 MFSD8-245ENST00000641743 948 ntBASIC2.86□□□□□ -1.959e-7■■□□□ 11.9
U2AF2P26368 MFSD8-261ENST00000642121 220 nt1.58□□□□□ -2.169e-7■■□□□ 11.9
U2AF2P26368 PCK2-207ENST00000559171 508 ntTSL 315.23■□□□□ 0.038e-8■■□□□ 11.9
U2AF2P26368 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.963e-6■■□□□ 11.9
U2AF2P26368 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.11□□□□□ -1.113e-6■■□□□ 11.9
U2AF2P26368 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.173e-6■■□□□ 11.9
U2AF2P26368 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.33e-6■■□□□ 11.9
U2AF2P26368 USP37-208ENST00000475553 613 ntTSL 44.27□□□□□ -1.733e-6■■□□□ 11.9
U2AF2P26368 CAMK2D-212ENST00000513132 2142 ntTSL 28.71□□□□□ -1.017e-8■■□□□ 11.9
U2AF2P26368 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.462e-6■■□□□ 11.9
U2AF2P26368 VPS29-204ENST00000548259 563 ntTSL 218.25■□□□□ 0.512e-6■■□□□ 11.9
U2AF2P26368 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.11■□□□□ 0.492e-6■■□□□ 11.9
U2AF2P26368 VPS29-209ENST00000551655 766 ntTSL 515.9■□□□□ 0.142e-6■■□□□ 11.9
U2AF2P26368 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.96□□□□□ -0.012e-6■■□□□ 11.9
U2AF2P26368 VPS29-211ENST00000553128 449 ntTSL 314.13□□□□□ -0.152e-6■■□□□ 11.9
U2AF2P26368 VPS29-208ENST00000550267 810 ntTSL 211.39□□□□□ -0.592e-6■■□□□ 11.9
U2AF2P26368 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC9.72□□□□□ -0.852e-6■■□□□ 11.9
U2AF2P26368 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.13□□□□□ -1.432e-6■■□□□ 11.9
U2AF2P26368 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.08□□□□□ -1.62e-6■■□□□ 11.9
U2AF2P26368 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.96□□□□□ -1.782e-6■■□□□ 11.9
U2AF2P26368 GPBP1-206ENST00000513524 529 ntTSL 53.48□□□□□ -1.853e-8■■□□□ 11.9
U2AF2P26368 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.953e-8■■□□□ 11.9
U2AF2P26368 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.91■■□□□ 1.421e-6■■□□□ 11.9
U2AF2P26368 ZFR-203ENST00000505204 552 ntTSL 412.42□□□□□ -0.424e-11■■□□□ 11.9
U2AF2P26368 GGCX-206ENST00000465637 563 ntTSL 415.28■□□□□ 0.045e-7■■□□□ 11.9
U2AF2P26368 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC11.46□□□□□ -0.585e-7■■□□□ 11.9
U2AF2P26368 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.995e-7■■□□□ 11.9
U2AF2P26368 HERPUD1-206ENST00000563343 567 ntTSL 48.46□□□□□ -1.063e-8■■□□□ 11.9
U2AF2P26368 HERPUD1-217ENST00000569429 562 ntTSL 47.34□□□□□ -1.233e-8■■□□□ 11.9
U2AF2P26368 AGO3-206ENST00000491443 548 ntTSL 212.55□□□□□ -0.42e-8■■□□□ 11.9
U2AF2P26368 NCKAP5L-205ENST00000491441 1911 ntTSL 1 (best)18.8■□□□□ 0.62e-10■■□□□ 11.9
U2AF2P26368 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.222e-10■■□□□ 11.9
U2AF2P26368 NCKAP5L-203ENST00000477361 2596 ntTSL 214.35□□□□□ -0.112e-10■■□□□ 11.9
U2AF2P26368 TRRAP-205ENST00000456197 11654 ntAPPRIS ALT2 TSL 1 (best)8.67□□□□□ -1.022e-10■■□□□ 11.9
U2AF2P26368 COX4I1-212ENST00000566617 572 ntTSL 432.02■■■□□ 2.723e-7■■□□□ 11.9
U2AF2P26368 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.313e-7■■□□□ 11.9
U2AF2P26368 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.52■■□□□ 1.363e-7■■□□□ 11.9
U2AF2P26368 COX4I1-205ENST00000563774 566 ntTSL 423■■□□□ 1.273e-7■■□□□ 11.9
U2AF2P26368 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.193e-7■■□□□ 11.9
U2AF2P26368 COX4I1-214ENST00000567266 546 ntTSL 422.5■■□□□ 1.193e-7■■□□□ 11.9
U2AF2P26368 COX4I1-213ENST00000567241 561 ntTSL 420.86■□□□□ 0.933e-7■■□□□ 11.9
U2AF2P26368 COX4I1-215ENST00000568339 2271 ntTSL 219.37■□□□□ 0.693e-7■■□□□ 11.9
U2AF2P26368 COX4I1-210ENST00000566115 471 ntTSL 317.47■□□□□ 0.393e-7■■□□□ 11.9
U2AF2P26368 COX4I1-209ENST00000565078 566 ntTSL 416.49■□□□□ 0.233e-7■■□□□ 11.9
U2AF2P26368 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.1■□□□□ 0.173e-7■■□□□ 11.9
U2AF2P26368 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.13e-7■■□□□ 11.9
U2AF2P26368 COX4I1-218ENST00000570123 551 ntTSL 514.81□□□□□ -0.043e-7■■□□□ 11.9
U2AF2P26368 COX4I1-206ENST00000564544 617 ntTSL 314.72□□□□□ -0.053e-7■■□□□ 11.9
U2AF2P26368 COX4I1-211ENST00000566405 490 ntTSL 513.69□□□□□ -0.223e-7■■□□□ 11.9
U2AF2P26368 COX4I1-207ENST00000564648 1235 ntTSL 510.15□□□□□ -0.783e-7■■□□□ 11.9
U2AF2P26368 LEPROT-202ENST00000475108 492 ntTSL 324.03■■□□□ 1.441e-10■■□□□ 11.9
U2AF2P26368 LEPROT-204ENST00000488747 345 ntTSL 512.2□□□□□ -0.461e-10■■□□□ 11.9
U2AF2P26368 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.161e-7■■□□□ 11.9
U2AF2P26368 PDS5A-209ENST00000512643 581 ntTSL 45.35□□□□□ -1.552e-7■■□□□ 11.9
Retrieved 100 of 36,523 protein–RNA pairs in 333.7 ms