RNA–Protein interactions for RNA: ENST00000573502.1

CDC27-214, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-214ENST00000573502 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
CDC27-214ENST00000573502 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
CDC27-214ENST00000573502 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
CDC27-214ENST00000573502 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
CDC27-214ENST00000573502 PLPPR3Q6T4P5 718 aa18.62■□□□□ 0.57
CDC27-214ENST00000573502 FOXD1Q16676 465 aa18.24■□□□□ 0.51
CDC27-214ENST00000573502 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
CDC27-214ENST00000573502 ADRA2BP18089 450 aa17.71■□□□□ 0.43
CDC27-214ENST00000573502 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
CDC27-214ENST00000573502 MSH5O43196 834 aa16.65■□□□□ 0.26
CDC27-214ENST00000573502 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
CDC27-214ENST00000573502 KCNA4P22459 653 aa16.37■□□□□ 0.21
CDC27-214ENST00000573502 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
CDC27-214ENST00000573502 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
CDC27-214ENST00000573502 MAPK8IP2Q13387 824 aaPredicted RBP16.01■□□□□ 0.15
CDC27-214ENST00000573502 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
CDC27-214ENST00000573502 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
CDC27-214ENST00000573502 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
CDC27-214ENST00000573502 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
CDC27-214ENST00000573502 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
CDC27-214ENST00000573502 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
CDC27-214ENST00000573502 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
CDC27-214ENST00000573502 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
CDC27-214ENST00000573502 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
CDC27-214ENST00000573502 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
CDC27-214ENST00000573502 ZBTB22O15209 634 aa15.12■□□□□ 0.01
CDC27-214ENST00000573502 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
CDC27-214ENST00000573502 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
CDC27-214ENST00000573502 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
CDC27-214ENST00000573502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
CDC27-214ENST00000573502 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
CDC27-214ENST00000573502 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
CDC27-214ENST00000573502 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
CDC27-214ENST00000573502 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
CDC27-214ENST00000573502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
CDC27-214ENST00000573502 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
CDC27-214ENST00000573502 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
CDC27-214ENST00000573502 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
CDC27-214ENST00000573502 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
CDC27-214ENST00000573502 APLP2Q06481 763 aa14.09□□□□□ -0.15
CDC27-214ENST00000573502 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
CDC27-214ENST00000573502 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
CDC27-214ENST00000573502 CAPN15O75808 1086 aa13.92□□□□□ -0.18
CDC27-214ENST00000573502 TRHP20396 242 aaPredicted RBP13.92□□□□□ -0.18
CDC27-214ENST00000573502 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
CDC27-214ENST00000573502 POLA2Q14181 598 aa13.77□□□□□ -0.21
CDC27-214ENST00000573502 DSG3P32926 999 aa13.73□□□□□ -0.21
CDC27-214ENST00000573502 ABCB7O75027 752 aa13.72□□□□□ -0.21
CDC27-214ENST00000573502 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
CDC27-214ENST00000573502 FKBP8Q14318 412 aa13.62□□□□□ -0.23
CDC27-214ENST00000573502 FBLN2P98095 1184 aa13.54□□□□□ -0.24
CDC27-214ENST00000573502 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
CDC27-214ENST00000573502 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
CDC27-214ENST00000573502 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
CDC27-214ENST00000573502 PROM2Q8N271 834 aa13.32□□□□□ -0.28
CDC27-214ENST00000573502 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
CDC27-214ENST00000573502 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
CDC27-214ENST00000573502 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
CDC27-214ENST00000573502 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
CDC27-214ENST00000573502 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
CDC27-214ENST00000573502 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDC27-214ENST00000573502 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
CDC27-214ENST00000573502 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
CDC27-214ENST00000573502 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
CDC27-214ENST00000573502 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
CDC27-214ENST00000573502 REM2Q8IYK8 340 aaPredicted RBP12.82□□□□□ -0.36
CDC27-214ENST00000573502 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
CDC27-214ENST00000573502 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
CDC27-214ENST00000573502 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
CDC27-214ENST00000573502 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
CDC27-214ENST00000573502 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
CDC27-214ENST00000573502 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
CDC27-214ENST00000573502 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
CDC27-214ENST00000573502 MIER1Q8N108 512 aa12.63□□□□□ -0.39
CDC27-214ENST00000573502 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
CDC27-214ENST00000573502 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
CDC27-214ENST00000573502 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
CDC27-214ENST00000573502 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
CDC27-214ENST00000573502 POTEHQ6S545 545 aa12.53□□□□□ -0.4
CDC27-214ENST00000573502 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
CDC27-214ENST00000573502 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
CDC27-214ENST00000573502 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
CDC27-214ENST00000573502 PKD2Q13563 968 aa12.46□□□□□ -0.41
CDC27-214ENST00000573502 ZBTB47Q9UFB7 747 aaPredicted RBP12.46□□□□□ -0.41
CDC27-214ENST00000573502 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
CDC27-214ENST00000573502 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
CDC27-214ENST00000573502 NUBP1P53384 320 aa12.4□□□□□ -0.42
CDC27-214ENST00000573502 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
CDC27-214ENST00000573502 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
CDC27-214ENST00000573502 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
CDC27-214ENST00000573502 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
CDC27-214ENST00000573502 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
CDC27-214ENST00000573502 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
CDC27-214ENST00000573502 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
CDC27-214ENST00000573502 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDC27-214ENST00000573502 GSE1Q14687 1217 aa12.22□□□□□ -0.45
CDC27-214ENST00000573502 RGL2O15211 777 aa12.2□□□□□ -0.46
CDC27-214ENST00000573502 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
CDC27-214ENST00000573502 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
CDC27-214ENST00000573502 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms