Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
APOA4P06727 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.43□□□□□ -0.1
APOA4P06727 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA4P06727 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.43□□□□□ -0.1
APOA4P06727 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.43□□□□□ -0.1
APOA4P06727 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.43□□□□□ -0.1
APOA4P06727 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
APOA4P06727 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.43□□□□□ -0.1
APOA4P06727 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA4P06727 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
APOA4P06727 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
APOA4P06727 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.43□□□□□ -0.1
APOA4P06727 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.43□□□□□ -0.1
APOA4P06727 AGAP10P-201ENST00000454844 2418 ntBASIC14.43□□□□□ -0.1
APOA4P06727 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.43□□□□□ -0.1
APOA4P06727 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA4P06727 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
APOA4P06727 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.42□□□□□ -0.1
APOA4P06727 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 Z93015.1-201ENST00000451718 390 ntBASIC14.42□□□□□ -0.1
APOA4P06727 BNIP3P42-201ENST00000454982 569 ntBASIC14.42□□□□□ -0.1
APOA4P06727 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.42□□□□□ -0.1
APOA4P06727 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 BNIP3P29-201ENST00000598302 571 ntBASIC14.42□□□□□ -0.1
APOA4P06727 AC011447.5-201ENST00000616168 564 ntBASIC14.42□□□□□ -0.1
APOA4P06727 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.42□□□□□ -0.1
APOA4P06727 AL591122.2-201ENST00000624125 1853 ntBASIC14.42□□□□□ -0.1
APOA4P06727 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
APOA4P06727 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA4P06727 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
APOA4P06727 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.41□□□□□ -0.1
APOA4P06727 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
APOA4P06727 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOA4P06727 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA4P06727 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA4P06727 AC072061.1-201ENST00000569710 2234 ntBASIC14.41□□□□□ -0.1
APOA4P06727 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms