Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.26■□□□□ 0.35
APPP05067 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.26■□□□□ 0.35
APPP05067 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.26■□□□□ 0.35
APPP05067 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
APPP05067 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.26■□□□□ 0.35
APPP05067 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.26■□□□□ 0.35
APPP05067 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.26■□□□□ 0.35
APPP05067 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.26■□□□□ 0.35
APPP05067 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.26■□□□□ 0.35
APPP05067 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.26■□□□□ 0.35
APPP05067 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.26■□□□□ 0.35
APPP05067 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
APPP05067 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.26■□□□□ 0.35
APPP05067 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
APPP05067 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
APPP05067 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.26■□□□□ 0.35
APPP05067 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.26■□□□□ 0.35
APPP05067 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
APPP05067 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
APPP05067 CR383656.2-201ENST00000548656 2254 ntBASIC17.26■□□□□ 0.35
APPP05067 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
APPP05067 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
APPP05067 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.25■□□□□ 0.35
APPP05067 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.25■□□□□ 0.35
APPP05067 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
APPP05067 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.25■□□□□ 0.35
APPP05067 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
APPP05067 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.25■□□□□ 0.35
APPP05067 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.25■□□□□ 0.35
APPP05067 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.25■□□□□ 0.35
APPP05067 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.25■□□□□ 0.35
APPP05067 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.25■□□□□ 0.35
APPP05067 AP001505.2-201ENST00000616815 443 ntBASIC17.25■□□□□ 0.35
APPP05067 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.25■□□□□ 0.35
APPP05067 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.25■□□□□ 0.35
APPP05067 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.25■□□□□ 0.35
APPP05067 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.25■□□□□ 0.35
APPP05067 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.25■□□□□ 0.35
APPP05067 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.25■□□□□ 0.35
APPP05067 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APPP05067 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
APPP05067 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
APPP05067 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APPP05067 AP002353.1-201ENST00000528257 1599 ntBASIC17.24■□□□□ 0.35
APPP05067 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APPP05067 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
APPP05067 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.24■□□□□ 0.35
APPP05067 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
APPP05067 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APPP05067 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.24■□□□□ 0.35
APPP05067 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APPP05067 TSPY25P-201ENST00000429463 745 ntBASIC17.24■□□□□ 0.35
APPP05067 IGHJ2P-201ENST00000454480 60 ntBASIC17.24■□□□□ 0.35
APPP05067 AC012618.1-201ENST00000461223 412 ntBASIC17.24■□□□□ 0.35
APPP05067 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.24■□□□□ 0.35
APPP05067 AC140658.4-201ENST00000561990 352 ntBASIC17.24■□□□□ 0.35
APPP05067 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
APPP05067 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms