Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TUBB4AP04350 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TUBB4AP04350 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.41■□□□□ 0.06
TUBB4AP04350 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TUBB4AP04350 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.4■□□□□ 0.06
TUBB4AP04350 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TUBB4AP04350 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TUBB4AP04350 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.4■□□□□ 0.06
TUBB4AP04350 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
TUBB4AP04350 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.4■□□□□ 0.06
TUBB4AP04350 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 FO681548.1-201ENST00000455617 1132 ntBASIC15.4■□□□□ 0.06
TUBB4AP04350 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 AC044860.1-202ENST00000559481 777 ntBASIC15.4■□□□□ 0.06
TUBB4AP04350 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.4■□□□□ 0.06
TUBB4AP04350 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.4■□□□□ 0.06
TUBB4AP04350 AC004835.2-201ENST00000603762 682 ntBASIC15.4■□□□□ 0.06
TUBB4AP04350 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.4■□□□□ 0.06
TUBB4AP04350 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TUBB4AP04350 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TUBB4AP04350 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 AC087499.5-201ENST00000452760 1342 ntBASIC15.4■□□□□ 0.06
TUBB4AP04350 KRT18P28-201ENST00000453838 1332 ntBASIC15.4■□□□□ 0.06
TUBB4AP04350 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TUBB4AP04350 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 RCC2P1-201ENST00000452257 1476 ntBASIC15.4■□□□□ 0.06
TUBB4AP04350 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.4■□□□□ 0.06
TUBB4AP04350 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TUBB4AP04350 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB4AP04350 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 AC004461.1-201ENST00000412461 403 ntBASIC15.39■□□□□ 0.05
TUBB4AP04350 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB4AP04350 VDAC1P7-201ENST00000462417 847 ntBASIC15.39■□□□□ 0.05
TUBB4AP04350 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.39■□□□□ 0.05
TUBB4AP04350 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.39■□□□□ 0.05
TUBB4AP04350 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.39■□□□□ 0.05
TUBB4AP04350 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC15.39■□□□□ 0.05
TUBB4AP04350 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TUBB4AP04350 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TUBB4AP04350 AC073869.1-201ENST00000415574 2762 ntBASIC15.39■□□□□ 0.05
TUBB4AP04350 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TUBB4AP04350 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TUBB4AP04350 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TUBB4AP04350 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TUBB4AP04350 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB4AP04350 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB4AP04350 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
TUBB4AP04350 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB4AP04350 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB4AP04350 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB4AP04350 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TUBB4AP04350 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.38■□□□□ 0.05
TUBB4AP04350 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms