Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC041040.1-201ENST00000425197 460 ntBASIC8.53□□□□□ -1.04
APOBP04114 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 CD37-203ENST00000426897 1204 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC8.53□□□□□ -1.04
APOBP04114 RPL29P2-201ENST00000488409 460 ntBASIC8.53□□□□□ -1.04
APOBP04114 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 BIN3-212ENST00000640731 450 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 AC069061.4-201ENST00000581294 1347 ntBASIC8.53□□□□□ -1.04
APOBP04114 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC8.53□□□□□ -1.04
APOBP04114 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 NAA10-205ENST00000393712 908 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 HNRNPA1P59-201ENST00000430583 918 ntBASIC8.53□□□□□ -1.04
APOBP04114 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 DBET-201ENST00000630918 3363 ntBASIC8.53□□□□□ -1.04
APOBP04114 OS9-207ENST00000439210 1946 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 TCAF2P1-201ENST00000291129 2421 ntBASIC8.53□□□□□ -1.04
APOBP04114 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 AC138392.1-201ENST00000427577 921 ntBASIC8.53□□□□□ -1.04
APOBP04114 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 AC090505.1-201ENST00000430515 1834 ntBASIC8.53□□□□□ -1.04
APOBP04114 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 SNORA47-201ENST00000458862 138 ntBASIC8.53□□□□□ -1.04
APOBP04114 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 AC012100.1-201ENST00000470304 282 ntBASIC8.53□□□□□ -1.04
APOBP04114 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 AC009118.3-201ENST00000622896 873 ntBASIC8.53□□□□□ -1.04
APOBP04114 AC099552.4-201ENST00000624248 949 ntBASIC8.53□□□□□ -1.04
APOBP04114 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 MIR766-201ENST00000390223 111 ntBASIC8.53□□□□□ -1.04
APOBP04114 DNM1P48-201ENST00000419538 439 ntBASIC8.53□□□□□ -1.04
APOBP04114 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC8.53□□□□□ -1.04
APOBP04114 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC8.53□□□□□ -1.04
APOBP04114 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC8.53□□□□□ -1.04
APOBP04114 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
APOBP04114 AL133551.1-201ENST00000610279 1222 ntBASIC8.53□□□□□ -1.04
APOBP04114 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
APOBP04114 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC8.52□□□□□ -1.04
APOBP04114 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
APOBP04114 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
APOBP04114 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
APOBP04114 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.04
APOBP04114 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC8.52□□□□□ -1.04
APOBP04114 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
APOBP04114 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
APOBP04114 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 IMPDH1P5-201ENST00000439688 1540 ntBASIC8.52□□□□□ -1.05
APOBP04114 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 RNF7-202ENST00000393000 805 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 MARCKSL1P2-201ENST00000401037 976 ntBASIC8.52□□□□□ -1.05
APOBP04114 RBMXP1-201ENST00000408004 1191 ntBASIC8.52□□□□□ -1.05
APOBP04114 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC8.52□□□□□ -1.05
APOBP04114 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 OR4A49P-201ENST00000527050 632 ntBASIC8.52□□□□□ -1.05
APOBP04114 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC8.52□□□□□ -1.05
APOBP04114 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
APOBP04114 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 RCC2P5-201ENST00000492126 1487 ntBASIC8.52□□□□□ -1.05
APOBP04114 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms