Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 AC006987.1-201ENST00000413610 527 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 AL807761.2-201ENST00000422849 729 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.85□□□□□ -0.35
ZIC3O60481 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.85□□□□□ -0.35
ZIC3O60481 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 GOLGA2P8-201ENST00000505201 779 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 AC005740.1-201ENST00000515639 522 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.85□□□□□ -0.35
ZIC3O60481 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.85□□□□□ -0.35
ZIC3O60481 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.85□□□□□ -0.35
ZIC3O60481 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 AL590824.1-201ENST00000403828 1349 ntBASIC12.85□□□□□ -0.35
ZIC3O60481 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ZIC3O60481 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC3O60481 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC3O60481 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC3O60481 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.84□□□□□ -0.35
ZIC3O60481 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZIC3O60481 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.84□□□□□ -0.35
ZIC3O60481 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 EEF1DP6-201ENST00000449232 372 ntBASIC12.84□□□□□ -0.35
ZIC3O60481 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.84□□□□□ -0.35
ZIC3O60481 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.84□□□□□ -0.35
ZIC3O60481 RNA5SP423-201ENST00000517127 109 ntBASIC12.84□□□□□ -0.35
ZIC3O60481 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.84□□□□□ -0.35
ZIC3O60481 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.84□□□□□ -0.35
ZIC3O60481 NDUFB10P1-201ENST00000567319 521 ntBASIC12.84□□□□□ -0.35
ZIC3O60481 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 AC007326.1-201ENST00000604539 458 ntBASIC12.84□□□□□ -0.35
ZIC3O60481 AL021707.6-201ENST00000609212 491 ntBASIC12.84□□□□□ -0.35
ZIC3O60481 BAP1-211ENST00000615113 489 ntBASIC12.84□□□□□ -0.35
ZIC3O60481 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
ZIC3O60481 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 AL157996.1-201ENST00000624684 2299 ntBASIC12.84□□□□□ -0.35
ZIC3O60481 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.84□□□□□ -0.35
ZIC3O60481 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZIC3O60481 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC3O60481 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZIC3O60481 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ZIC3O60481 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
ZIC3O60481 LINC02486-201ENST00000604157 3000 ntBASIC12.83□□□□□ -0.35
ZIC3O60481 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
ZIC3O60481 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZIC3O60481 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZIC3O60481 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC3O60481 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms