Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 AL139400.1-201ENST00000366220 510 ntBASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 MIR3687-2-201ENST00000577708 61 ntBASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 MIR3687-1-201ENST00000614492 61 ntBASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 AL138725.1-201ENST00000407347 1314 ntBASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.1□□□□□ -0.47
KCNIP3Q9Y2W7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 USP17L6P-201ENST00000382470 1197 ntBASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 FDX1P1-201ENST00000449115 551 ntBASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 VDAC1P7-201ENST00000462417 847 ntBASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 GCOM2-201ENST00000509133 1104 ntBASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AC069120.2-201ENST00000524091 540 ntBASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 RARRES2P5-201ENST00000564013 466 ntBASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP3Q9Y2W7 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
KCNIP3Q9Y2W7 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.08□□□□□ -0.47
KCNIP3Q9Y2W7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
KCNIP3Q9Y2W7 AC024075.2-201ENST00000598112 1473 ntBASIC12.08□□□□□ -0.47
KCNIP3Q9Y2W7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms