Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 AP001267.2-201ENST00000532619 2086 ntBASIC14.85□□□□□ -0.03
DNMT3BQ9UBC3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 GCSHP3-201ENST00000431120 391 ntBASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 RN7SL788P-201ENST00000460504 316 ntBASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 RN7SL23P-201ENST00000484055 275 ntBASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 FO393412.1-201ENST00000619841 382 ntBASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 AC011471.3-201ENST00000623576 402 ntBASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 AC232323.1-201ENST00000540724 2099 ntBASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
DNMT3BQ9UBC3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 AC041040.2-201ENST00000622926 2899 ntBASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 AC011498.7-201ENST00000624986 2027 ntBASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
DNMT3BQ9UBC3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
DNMT3BQ9UBC3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms